UFO03230.5prime Sequence
434 bp (374 high quality bases) assembled on 2009-02-03
> UFO03230.5prime
CAGTCGACATGACGTTGCCCGAGTTCTTTGGCTGCACCTTCATCGCCTTC
GGACCGCCCTTCGCCTTGTTCGTCTTCACCATCGCCAATGATCCAGTGCG
GATCATCATTCTGATTGCGGCGGCATTCTTCTGGCTGCTTTCCCTGCTGA
TCTCTTCCCTGTGGTATGCCCTGATTCCGCTGAAGGAGTTCCTGGCATTT
GGCGTGGTCTTCTCGGTGTGCTTCCAGGAAGCCTTCCGGTACATCATCTA
CCGGATACTGCGCAGCACGGAGCAGGGATTGCACGCCGTGGCGGAGGACA
CGCGAGTGACGGACAACAAGCACATCCTGGCCCTATGTCTCCGGCTTGGG
ATTCGGCATTATATCCGGGATGTTTGCACTGCTCAATGGTGCTGGCTGGA
AATGGAGTGGGCCCCGCCACCAGGGGCTTGGAAG
UFO03230.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:31:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| aph-1-RB | 990 | CG2855-RB | 83..499 | 9..430 | 1910 | 97.6 | Plus |
| aph-1-RA | 863 | CG2855-RA | 83..499 | 9..430 | 1910 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:31:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2766315..2766693 | 9..388 | 1835 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:31:53 has no hits.
UFO03230.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:07:08 Download gff for
UFO03230.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aph-1-RA | 73..482 | 1..414 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:20 Download gff for
UFO03230.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aph-1-RA | 75..484 | 1..414 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:17 Download gff for
UFO03230.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aph-1-RA | 75..484 | 1..414 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:17 Download gff for
UFO03230.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2766307..2766708 | 1..405 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:20 Download gff for
UFO03230.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2766307..2766708 | 1..405 | 97 | | Plus |
