UFO03243.5prime Sequence
1155 bp (1043 high quality bases) assembled on 2009-02-03
> UFO03243.5prime
CAGTCGACATGAAGTCGAACGGCTTCTTTGTTTCTCGTTTAAAACAACCA
AATATTGCTCCAACACTTCCAGTACTTTCTCCACATTCACCAATGAATGC
TAATATACATATAAATAGCCAGCATACCCAACTTTCCGGTCGATATCTAA
ATAACAAAGTGTCCCAACAAATCGACACTGAAAGTATAAAAAGAGTGGCA
TCTAACCGATCTCTAAAGGACAGTCAAAACGTCTTATCCATTTCATCAAC
TCTAATATGCAACTGCGAGAAGGCCCAAAAATCGAATGGCTCAGAAGCGG
AAGCAAACGAAGAAATCAAAATTAAACTGAGCTCAGATACTGGTAACAAA
TCTACCATTAGTAAATTAAAAGACCCGAAACTCTCTTCAGCGTCGGAAAA
AAACGCATTAGATAATTCAACCGAGGGTTGTTTGCAATTGAAAAGTGTAA
TTGGAAAGGAGCAAAAATCGCTGTCTCCGAGACTGACGTTACACAAGAGT
GGGTTTCAACAGGCCATCATAATTTCCGACGACAGTGAGAACACGAAGTC
TTCGCGATTAGGTACCCAAACAGCAAGGCAGCTCTCCAGTAATTCAGACA
ATCAATTTTATCGACAGCTTACCCATAAGATTAGCAAATCGGAGCAAACT
TCCCCAAACAACTTGGAGCTAGACAAAGCTAACTTTCTCTACGATACGAA
CAATAGGAGTACGGGCTGTTTGGTGTATCCTTCGGATCCATGGATAAAGA
ACTCGCATATTAAGAACAGCTTGTCCCCCAAAACGGAAAAGTATTCAAAC
ACCATGCATCACAATATCGATCCGTGGGTCAAGAGACAAACAGATGCTGC
TGTGGAAATCTCACGGCTTCCCAAGAAAATTTCTACCGCGAAAATCCCTT
TCTTCATAAACAATAAACTAATTTCGACCAGAACTGAAAAATCAAAGTGT
GCAAAGCCGCAGTGAGCATCGAAAACGGAGCTGGACGATGATCAGTATTT
TAATGAGCAGGATTGCTTTGCTCATTCCTCTCCGCAATATCGCACACGTC
GCATAAATCTGGTCCCCGACAGCTTCTACGATCTGAAAGCAACATCAAGC
CAGTCAGCTAGTTTTACGGACAGGGTAAAGGAAATTCAGTCAATGCCACC
GTTGA
UFO03243.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:22:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33096-RG | 3581 | CG33096-RG | 1561..2712 | 5..1132 | 5055 | 97.2 | Plus |
| CG33096-RF | 3465 | CG33096-RF | 1445..2596 | 5..1132 | 5055 | 97.2 | Plus |
| CG33095-RB | 3581 | CG33095-RB | 1561..2712 | 5..1132 | 5055 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:22:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25100126..25101191 | 5..1057 | 4695 | 98.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:22:06 has no hits.
UFO03243.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:16:21 Download gff for
UFO03243.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33095-RB | 466..1621 | 1..1132 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:20 Download gff for
UFO03243.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33095-RA | 131..1286 | 1..1132 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:09 Download gff for
UFO03243.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33095-RB | 1557..2712 | 1..1132 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:09 Download gff for
UFO03243.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25100122..25101277 | 1..1132 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:20 Download gff for
UFO03243.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20925844..20926999 | 1..1132 | 96 | | Plus |
