UFO03244.5prime Sequence
1136 bp (1022 high quality bases) assembled on 2009-02-03
> UFO03244.5prime
CAGTCGACATGGCCAGCGATATTCCACCTTCAGCCATCCGTATTTGGATG
GACAAGCTGAAAAAGGGCGTTGGGCAGCCGGCGACAGTCCTAGAGCGTTC
CCTGCTCAATTTAATGAGTGCAGAAGCAGCCAGTTTATCGGTGAAAAATG
CCACGGAGCGAGGCATACTGGTGGCCAGAGCAGGCGGCGGACGGTCCAAG
CGTCTGGCCCTCGCCTTTTGTCAAAAAGTAAGCCGGCTGCCCAGCTCACC
AATTGATCCGTTCTGCTTCGAGTGCCATTTGCCCGGAGCCGTTAAGAAAT
GCATATCCTGCCATCGCTCCTTCCACGAGAATTGCCAGCGACAGGACCCG
GAGAAGCCCAATTATTCAGTGCCCTCGGACAAGGGCCAACCTTACCAGTT
TCCCGTCAACGAATTGGACAATCAGCCCCTGAATAACACTCAGAACTTGG
AGACTCCCCAAACGCCAACGCCCCTGCTCGATCATAATAGCAACATCAAT
CAGACTTTGCTAGCCACTACGGATTTCCTGAAGCACGAGAACATCGAGTG
GGACGACGACGTCTTCTTTGTGTGCGAACAAAAGGGCGCGCGCCAGCGAA
AGCTGCCCAGGATCAAGGACGAACTACAAAGCAGTTTGGATAGCGATGAG
GGAAGCGATCTGGAGCGCTGCACCCACTGCCGTTTGCTCGCCCTGGCCGC
TCTCCACAACCCACCGCAACTCGACAAGCAAGAGCTGGGCTGCCTATTGA
AGTACTCCTGGGACCAGCATCACTCCTGGATCTCCATGGATGTGGCCAAG
TACATGGCCAAGCATTGGAACGAACGCGACAAGGCGCTGGTTAAGCGGCT
ACTCTTCAAGACAAAGATTTTGGGTCTGGGCGACATCGAGCGCAACATAG
CGGCGGCGAAGTATACGTACCTAACAGAATTCCTATGGATCTGCTCGATC
TGCAGCACACATGGCCGTGTTCTTTGGGCAAAGAGCGTTGAGTACATGCC
ACAGTGCTGATGGAGAGATGTGACGCACGACATCGCGAAATCCGTCGTGC
CCCGACTGCTATAGGTATTCACGAGCAGCTGTCGGATCCTCTGGTTCGCC
AGCCATGTCTCACGGCCGATGATTGCAGCAGGTGCT
UFO03244.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:13:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8569-RA | 2334 | CG8569-RA | 68..1182 | 9..1110 | 5190 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:13:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12519410..12520367 | 121..1070 | 4335 | 98.5 | Plus |
| 2R | 25286936 | 2R | 12519233..12519347 | 9..123 | 575 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:13:41 has no hits.
UFO03244.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:16:18 Download gff for
UFO03244.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8569-RA | 77..1211 | 1..1119 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:59:54 Download gff for
UFO03244.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8569-RA | 60..1194 | 1..1119 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:45:52 Download gff for
UFO03244.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8569-RA | 60..1194 | 1..1119 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:45:52 Download gff for
UFO03244.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12519225..12519347 | 1..123 | 96 | -> | Plus |
| 2R | 12519413..12520424 | 124..1119 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:59:54 Download gff for
UFO03244.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8406730..8406852 | 1..123 | 96 | -> | Plus |
| arm_2R | 8406918..8407929 | 124..1119 | 98 | | Plus |
