UFO03246.5prime Sequence
1129 bp (1023 high quality bases) assembled on 2009-02-03
> UFO03246.5prime
CAGTCGACATGAAGAGGAGCACCACCCAAATTCTGACCAGGTTGAGGGAG
CTAATGCTCCGCGCCCAGGTGGGCGACTCCTGCGGCATATCGGCATACAT
TGTGCCCTCGGACGACGCCCATCAGTCGGAGTACCAGTGCCAGCATGACG
AGCGACGCTCCTTTGTGAGTGGTTTCGATGGATCCGCTGGCACGGCGGTG
ATAACGACGGAGACCGCACTGCTGTGGACCGACGGTCGTTACTATCAGCA
GGCGGAGAAGCAGCTGGACTCCAATTGGGTTCTAATGCGGGATGGTCTGA
GCGCCACCCCGTCGATTGGCGCCTGGCTGGCGAAGAATCTGCCCAAGGGC
AGCTTTGTGGGCGTGGATCCTCGCCTGTTGTCGTTCCGCGTATGGAAACC
CATCGAAACGGAACTAAGCTCCGCGGAATGCCAGCTGGTGCCCATCGAAG
GCAACCTCATCGACGAGGTCTGGGGTGAGGATCAGCCACCGCAAACCTCA
AACAAGATTATAACCCTGAAACTAGAACATTCTGGCGTAACTATCGCCAA
AAAATGGGACGTGGTGCGCCAGCAGTTGAAGGAGAAGAATGCTGATGCCC
TGGTGGTCAGTGCTCTCGATGAAATCGCTTGGTTCTTGAACCTACGCGGC
TCGGACATTGACTTCAACCCCGTCTTCTTCTCCTACTTGATTGTGACCAA
CGATGAACTACTGCTCTTTGTGGACTCTGGCAAATTGCCCACTGATTTTG
TGCAGCATCAAAAGGAGAACAATGTGCAGATAAGCGTTTTGCCTTACGCC
TCAATTGGCATTGAAATCAGTAAGATTGTGTCGACCAGGGAGTCAAAGAT
CTGGATAGCACCCACCAGCAGCTACTATCTAACTGCTTTGATACCCAAGT
CACGTAGATTCAGAGGTAACGCCGATTTGTGTGCTGAAGGCCATTAGACG
ATGTCGAGATCGCAGCTTCATCAACAGCCACATTCGCGATGGGAGTCGCT
TGGTGTCAGTATTTCGCCTGCCTGGAGATCAGTGAATAAGGGTGGCGGAA
GTCGAATGAATGTCTGGTGCCGATAACTTCGAGTCCTTTCCGGTCGACAA
GATAAGTACTTGGTCCTTACTTCACACAT
UFO03246.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:27:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ApepP-RB | 2190 | CG6291-RB | 262..1385 | 9..1125 | 5170 | 98 | Plus |
| ApepP-RA | 2066 | CG6291-RA | 138..1261 | 9..1125 | 5170 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16909041..16910157 | 1119..9 | 4905 | 97.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:27:27 has no hits.
UFO03246.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:16:39 Download gff for
UFO03246.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ApepP-RA | 147..1274 | 1..1125 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:12 Download gff for
UFO03246.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ApepP-RA | 134..1261 | 1..1125 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:02:15 Download gff for
UFO03246.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ApepP-RA | 134..1261 | 1..1125 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:02:15 Download gff for
UFO03246.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16909028..16910161 | 1..1129 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:12 Download gff for
UFO03246.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16909028..16910161 | 1..1129 | 97 | | Minus |
