UFO03250.5prime Sequence
829 bp (503 high quality bases) assembled on 2009-02-03
> UFO03250.5prime
CAGTCGACATGCACAACAGTGGAGGACAATCCGGCTGGAACCTTTCAGGA
GAGGAAAGAAAACCGTTTTCGAATTACGGCCGCAACAATCAGCAGAGGCG
CAGCAGTGGAGGCGGGGGAAGAGGCAGCCACAGCCAAAATCGCGCCGCCA
ATGGAAACTGGCCAGACGCTGGATCGGAAGGTGGGCAGAATGGAAACGCG
TTTAACAAGTTCAGAGATCCCCAACAGGAGCTGGATAATCATCAGCCAAA
CAAGAGAGGGGGCCGAAGAAATAGAGGCGGTGGCGGAGGAGGTGGTGGTT
GGGGTGGCAGGCGAGGGAACCGCGGCAGAGATTCCAATAGGCGTGGTGGC
CGTAACAACTCGTGGCAACCTAAGGATCAGCATGTTAGTCCTGGCCAATG
TAACATGCTGTACTTCCATAATGTGGGGGACTTTACCGAAGACCCACCTC
TGCCTCGATCCTCCCCCGCCCCCTCCTCTCTCAGAGAGGAGAGCCTGCCA
CCTGTCACTTTCGCTGCGGACTTGACGCCACCACCACCTGTATCTGTTGC
ACCATCTGATGTGGCTGTTTCCCCAGAAGAACCTACTGTGCTGCTAATCA
ATATCCAGAATGACATAGAAATGGGACACAAGTGTAAAATATGGAAATTG
ACGAGCGGAGCCCAGTCTCCTAAAAAGCAGAAAGGTTACTCCCCTAGGTC
GTTGTTGACTTTTGGGAGAGGAATTCCGAACCCTAAACCGGGGAAAAGGT
AATAAACCAAAGGCACTGGTGGTGCTGCCCCCCAATAGCGAAGGCATCAA
ACACCTGTACATCAAGTCCGAAACAAAAT
UFO03250.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:22:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mbm-RA | 1756 | CG11604-RA | 82..905 | 9..828 | 3135 | 92.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:22:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 272938..273634 | 702..9 | 2890 | 95 | Minus |
Blast to na_te.dros performed 2014-11-28 19:22:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 6649..6675 | 394..368 | 108 | 88.9 | Minus |
UFO03250.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:16:04 Download gff for
UFO03250.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mbm-RA | 459..1159 | 1..702 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:17 Download gff for
UFO03250.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mbm-RA | 78..778 | 1..702 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:07 Download gff for
UFO03250.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mbm-RA | 78..778 | 1..702 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:07 Download gff for
UFO03250.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 273019..273638 | 1..624 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:17 Download gff for
UFO03250.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 273019..273638 | 1..624 | 96 | | Minus |
