UFO03252.5prime Sequence
319 bp (225 high quality bases) assembled on 2009-02-03
> UFO03252.5prime
CAGTCGACATGTGTGGAATATTTTGTTCAGTCGTGAACAATGTTCCTTTA
AACTCCTTTAATATTTCTAGCGCTCTGAAAGTAATTCTGAAAAACCGCGG
TCCTGATGTGCAAGACGAGGTGGTTATAGATTATTGTTTTGGAAAAATTT
TATTTGCTGGCTTCGTGTTATGGCAACAAGGGGAAAGTGTACAAAAGCAC
CTGTGGTGGAGGACGATTTTATATTTCTTTTTCATGGAAACATTTACAAT
ATTTCAAAGCCTGAATATATGTCTTACCCGACTTGGATACCGAAAAGGCT
ACTTAATGCCGTTTAAAAA
UFO03252.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:25:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17486-RB | 1804 | CG17486-RB | 37..343 | 9..313 | 1350 | 96.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:25:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 4619066..4619359 | 9..301 | 1300 | 96.9 | Plus |
Blast to na_te.dros performed 2014-11-28 23:25:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gypsy9 | 5349 | gypsy9 GYPSY9 5349bp | 4271..4309 | 168..128 | 101 | 75.6 | Minus |
UFO03252.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:16:00 Download gff for
UFO03252.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17486-RB | 30..344 | 1..314 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:51 Download gff for
UFO03252.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17486-RB | 29..343 | 1..314 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:01:16 Download gff for
UFO03252.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17486-RB | 29..343 | 1..314 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:01:16 Download gff for
UFO03252.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 4619058..4619372 | 1..314 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:51 Download gff for
UFO03252.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 506563..506877 | 1..314 | 94 | | Plus |
