Clone UFO03254 Report

Search the DGRC for UFO03254

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:32
Well:54
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO03254.5prime Sequence

1144 bp (1049 high quality bases) assembled on 2009-02-03

> UFO03254.5prime
CAGTCGACATGGAGAGCCGCAGCGACATCCATCGCCAGTTGGCAGCCTCG
CTAACGGATGAGCTGGTCAAGCCGCTCAAGATCGTCGTCGAAGGACATCA
CAAGGCGCGCAAGGCGGTGGAAAGCAACGTGGACAAGGCGGCGCGAGTAC
TGGGCGAATGGCGAGCCAGCGAGGCGAAAGCCAAGAAGGCCTCCCATACG
GCGGCGCGCGAGAACGAGAAGCTGCAGGACGCAATGCTGGACGTGCGCAT
CCAGAAGTCACCATCGATTGCCCTGCTCCACCAGGGACCCAACAAGCAGG
CCGCAGAAAAGGAGCTCAAGTCAGCGGAGAAGGATTGCGTCAAGCTGGAT
AACAAGCGCAAGAAGGCCGAGGAGGCGGTGAAGCGTGCGGATGTGGAATA
CTACACCCTGTGCGTGCGTTCGGAGCGAGCACGCGTAGACTGGGAGATGG
CCGTGCTCCGGGGAAGTGCCCAACTGCAGAGCAGCGAACAGCAGCGGCTG
GGCAATATGCACAACTTTGCCCAGCAGTATGCACGCCTCATCTCGGACAT
GAATCCGATACTCGGTGGCCTGAGCACACGCCTGCAGCCGCAACTCGATG
CTTGCAATGTGGCTAAGGATATGCAAGTGGTGCGCCACATCCGCCGCAAT
TCGGAGGGACCCAGTGAGCAACTCCTACCGGACTTTTACTGCGAACACAC
CACGCTGGCCATGAATCGGGAGCGTCGCAAGCACGCTCTGATCAAGCTGC
TGCAGCTGGTCAAGACGGATCTGGAGCGGGAGCGACGATCCCGCGACGGA
TTGAGGGGACTGTCGCAATCGCTTAACCATCAGGAGCATCAGAACATCAC
CGATAAGCTGTACCACATTCGTTCCATGCTGACCTATTTGGAGGGCGCCC
GTCTCAAGCTGCACTCTGCCTCTTGGAGCTGGACCACAAGCCCAGAGCCA
CTCACCCACTGGCCAGCACATTCATATCACCCGTGACCGCACTGGTTGCA
GCAGAGCATCCTGAGGTGCCCAACTGGCTGAAGAACAACGAACAAGTCGC
AGACGCAGCAATCGACAGAATCTGGACCACGACATTCACCGAACTAAACA
CTAAACAGAGGATGGCTTCGGACAGAAACTGCTCCCACTGGCAG

UFO03254.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG42388-RG 5133 CG42388-RG 2039..3175 9..1138 5270 98.2 Plus
CG42388-RD 2735 CG42388-RD 897..2033 9..1138 5270 98.2 Plus
CG42388-RC 3014 CG42388-RC 1176..2312 9..1138 5270 98.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:16
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9051467..9052217 116..866 3755 100 Plus
X 23542271 X 9051303..9051412 9..118 550 100 Plus
X 23542271 X 9052278..9052388 867..975 455 98.2 Plus
X 23542271 X 9052450..9052541 976..1066 315 96.8 Plus
Blast to na_te.dros performed on 2014-11-28 20:15:17 has no hits.

UFO03254.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:15:57 Download gff for UFO03254.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42388-RF 665..1730 1..1066 99 == Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:08:49 Download gff for UFO03254.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42388-RC 1171..2236 1..1066 99 == Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:43:06 Download gff for UFO03254.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42388-RC 1171..2236 1..1066 99 == Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:43:06 Download gff for UFO03254.5prime
Subject Subject Range Query Range Percent Splice Strand
X 9051298..9051410 1..116 96 -> Plus
X 9051468..9052217 117..866 100 -> Plus
X 9052278..9052388 867..975 98 -> Plus
X 9052450..9052541 976..1066 96 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:08:49 Download gff for UFO03254.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 8945331..8945443 1..116 96 -> Plus
arm_X 8945501..8946250 117..866 100 -> Plus
arm_X 8946311..8946421 867..975 98 -> Plus
arm_X 8946483..8946574 976..1066 96 == Plus