UFO03260.5prime Sequence
1123 bp (1022 high quality bases) assembled on 2009-02-03
> UFO03260.5prime
CAGTCGACATGTTAAGCAAAATGGCTAGCAACACAAGCGGCGGGGGAGGT
ACCACTTCAGGCACTGGAACGGGACGTCGTCTGCCACTCTCGCTGAGCGG
CGGTTCCACCGTCACGCGCTTGCAGCAATCTTCTGGCAGCAACGGCCGCT
CAAATAGCCCCCAAAATGGGAACAAAAAGATCACAGAGTCATTTTTGCCG
GTAAAAAAGAGCAACCAACCGCGGACCACTTCGACTGGATCCACCGGATC
CAGCCAGAACGGCGTAAGCAAGCCCACAAATGGCAAAGATAAGTCACAGA
ATGGCAGCTCAACAGGCAAAGACCAGAAGGTAGAGAAATCTAAAGATAAG
TTGCCGGAAAAGAAGGCAAAGGAAGTGGGTGCCGAGAATAAGGATAAGGA
TGGCGCTGCCGAGATGACAGATATGGAGGTTGTGGTCGAAAATAAGCAAA
AGGAGGTGGTATCCGAAAATAAGCAAAATGAGGTGGTATCTGAAAATAAG
GAAGTGGTATCTGAAAATAAGGAGGTGGTATCCGAAAATAAGGAGGTGGC
TTCCGAAAAAAAGGTGGTGGTAGCTGAAGTTCCCTCCGACAAAGACGACA
ACGGAGAGACCAAAAAAGATGATGCTACCGTTGAGAGTACTGCTCCTGCT
TCTCAAACGCCTGCGGATGCTGCGGTAATCATCGATGAAGTAGTGTTTAT
TCCCGATCTCAGCACTCCTACTAAGGATCGCAAGTCTACACGCAAGTCGG
GTAGCCAGCAAAAGTCACCCATCAGCAAGGCAAGCAACGCTTCGCCTGTC
CAGAAGATAAAAACCGAAGCAGTTTCTTCATCGACATCGGGCTCTTTGAC
TCCACAAGAAGATGTCGATATGGAACCGCTACAAGTGGATGCCTCTCCCA
TACGCAGCGTCACGGCAATTTGAATGCCGTGCCGACGCTACATCCACGCC
CGGACGCAGTCTCTCAGTTTCGTGTAGCAACAAGCAAAGCACCGAGGTAG
AGCTGCTGCCCAGACTTCAGCTCGCGGCAGACTCGCTCGCACTTCGCCCG
AATCAGCGCCAGGCGTAGCATACGAACCATCGACTCACTGAACGTCCCTC
GAAAAATAGGGCAACGCTACACA
UFO03260.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:51:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kuk-RC | 2200 | CG5175-RC | 116..1223 | 9..1105 | 5135 | 98.3 | Plus |
| kuk-RB | 2238 | CG5175-RB | 154..1261 | 9..1105 | 5135 | 98.3 | Plus |
| kuk-RA | 2231 | CG5175-RA | 147..1254 | 9..1105 | 5135 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:51:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17082697..17083792 | 9..1091 | 4845 | 98.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:51:40 has no hits.
UFO03260.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:16:09 Download gff for
UFO03260.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kuk-RB | 146..1265 | 1..1113 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:43:00 Download gff for
UFO03260.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kuk-RA | 141..1260 | 1..1113 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:31:49 Download gff for
UFO03260.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kuk-RA | 141..1260 | 1..1113 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:31:49 Download gff for
UFO03260.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17082691..17083810 | 1..1113 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:43:00 Download gff for
UFO03260.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12908413..12909532 | 1..1113 | 97 | | Plus |
