UFO03265.5prime Sequence
1152 bp (1015 high quality bases) assembled on 2009-02-03
> UFO03265.5prime
CAGTCGACATGGACAAAATCAAGTTAAAGGTTATTGGCGTGCTGCGCGAA
CGCGATGGTGGAAATCGTAGTGGTTCTGGAGGATTGGGGGCAAGTGCTGG
AGCAGGAGCTGGATCTGGCGGAGTTACGGCAACAGCAGGCCATCAGTTGG
CCTCCGCAGGAGGAGCGGGCGTGGCGCAGCCCTCGATTGGGGTCACACAG
GATAATAACAACGAAGGCAACGCCCCGGGAGGTGGAGGAGCAGTAATCGA
ACCCCAGGCAACGGGAGGAGCCGCCGGACCATCTGGTGGAGTTGGTGGCG
CCGCTAGAACATCGGTGCTATCCAGACCGCAGACCTCCAAGATTAGCGCT
CTAGACCTGGCCGGTATACTCAACACGCGGAGAAGACTCGAGTGGACCAA
GGAGTGGCTGCGCAAAAACCAGACCGAGTTTCTCAGCAAGGAGAATTTAC
TTAGTGAACTGCAGTCGCGCAAGGATGAGTGCTATCACTTGAATTACTTT
CTAGCCATAACAGAGAGCCAGTTTCGGTATCTAGTGCAAAAGCTGGAGCC
CATCATTAGCCAGTATGCTCCGCAACGCAAGAAGAAGTCCTTCAGCGCCG
AGGAACGACTGGCCATAACGCTCAAGTATTTGGCAACGGGTGAAGTACAT
TCTTGTCGAAACTACTGCTTCCGTGCCTCGAAATTTGTGATAAACGAAAT
GATTGCCAATATCTGTCTGGGCTTCTACGAGCACCTCAAGGACCAATACG
TGACACTACCAAAGACTGACGATCAGTGGCGCAGCGCCGCCGAGGAGATG
GAGCGTAAGCACAACCTGCCCCACTGTGTGGGCAATCTGTTCATGCGCAG
CATCCAACTCCAAGGCTCTGGGACCGCTTCGAGTTCCGGAGCGGCGAGCA
GCGCATCCGCCGTTGGCGACGATCGCAAGCGCGCGACCGTCATCTTCACG
GGCATTGTGGATGCCGACAACATTTCCAGTACGCAAGGTGGAAAGGCGGC
GAGCAGCGACCCATGACATCTATAACCAGAACAGTGCCATCGAGCTGATT
AGGCACAAGATGCACGCTCTGAGAACAAAGTCGGTCGGAAAATGAACGAA
CGGGCTATTACTTTGTCTGGCGATTCGTACTGCCTGCCCACCTCGGTATC
TG
UFO03265.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:14:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7492-RA | 2674 | CG7492-RA | 508..1657 | 8..1152 | 5340 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7653459..7654092 | 641..8 | 3170 | 100 | Minus |
| 3L | 28110227 | 3L | 7652964..7653401 | 1071..639 | 1925 | 98.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:14:37 has no hits.
UFO03265.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:15:35 Download gff for
UFO03265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7492-RA | 495..1650 | 1..1152 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:15:07 Download gff for
UFO03265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7492-RA | 502..1657 | 1..1152 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:04:18 Download gff for
UFO03265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7492-RA | 502..1657 | 1..1152 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:04:18 Download gff for
UFO03265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7652883..7653400 | 640..1152 | 96 | <- | Minus |
| 3L | 7653461..7654098 | 1..639 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:15:07 Download gff for
UFO03265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7645983..7646500 | 640..1152 | 96 | <- | Minus |
| arm_3L | 7646561..7647198 | 1..639 | 99 | | Minus |
