UFO03268.5prime Sequence
1118 bp (1045 high quality bases) assembled on 2009-02-03
> UFO03268.5prime
CAGTCGACATGTCGGTGGTTATAGAAACCACGATGGGTGACCTGACCGTC
GACCTGTTCATCAGCGAGCGCCCAATTGCCTGCCTAAACTTCCTCAAGCT
GTGCCGGCTGAAGTACTATAACTTCAATCTATTTCACACGGTGCAGCAGG
GATTCATCGCCCAAACAGGCGATCCGAGTGGAGCTGGAGACGGCGGATCC
TCCATCTGGGGCGTGGTGGAGGGTCCGCAAAAGCGCTTCTTCGAGGCGGA
GTTCCTGCCCAAGATTAACCACTCCAGTGCCGGAATGCTATCGCTGGTCA
GTGCAGGCAAGAATCTGGTGGGATCCCAGTTCTTCCTCACGCTGGGTGAG
AACCTAACATCGCTGGACGGCAACCACTGCGTTATCGGTGAAGTGGTGGA
AGGTCACGAGGTGCTGCGCAAGCTAAACGACGCCATTGTTGACGACAGCT
TCCGTCCTTACCAGGATATACGCATCACACACACTGTTGTGCTTGAGGAT
CCGTTTCCTAATCCGCGCGGCCTTCAGGCTCCAAGTCGCTCACCTTCGCC
CAGTGCGGAGCGTCTGAAGAACGGGCGCATCGCTGCCGACGAGGATATCG
ATGACACTGATGGCATGACCGCGGAGGAGATGCAGGAGATGCTGGCCGAA
CGAGAGGCCAAGGCTCGAGCCACAATCCTTGAGATTGTCGGCGATTTACC
CGATGCAGACATGGCTCCGCCAGAAAATGTCTTGTTTGTGTGCAAACTCA
ATCCTGTTACAACCGACGATGATCTGGAGATAATCTTTAGTAGCTTCGGC
GTGCTTAAAGGATGTGAGGTGATTCGCGACCGCAAAACGGGAGATTCTCT
GCAATATGCTTTTGTGGAGTTCGAGGATCAAAATCTTGTGAGGCCGCATA
TTTCAAAATGGATAATGTGCTTATCGACGATCGACGCATCCACGTGACTT
CTCCCATCCGTTTCAAAGTCACCTGGCGGGGCAAAGACGTGTATGAGGGC
GACTATAGAAAGCTGGATTTTAACATTTGCGAGACGACAAGATCACAGAA
ACAACATGGTCGTCAGAACAGAAGACCATAGGAGCGCAACGACGAGATTT
CGAATAGGATAACTCTGC
UFO03268.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:47:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5808-RA | 2043 | CG5808-RA | 56..1188 | 9..1118 | 5090 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:47:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24815913..24816952 | 1040..9 | 4805 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:47:03 has no hits.
UFO03268.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:15:29 Download gff for
UFO03268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5808-RA | 46..1167 | 1..1100 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:39:41 Download gff for
UFO03268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5808-RA | 46..1167 | 1..1100 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:45 Download gff for
UFO03268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5808-RA | 46..1167 | 1..1100 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:45 Download gff for
UFO03268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24815841..24816956 | 1..1100 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:39:41 Download gff for
UFO03268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20641563..20642678 | 1..1100 | 97 | | Minus |
