UFO03270.5prime Sequence
1121 bp (1019 high quality bases) assembled on 2009-02-03
> UFO03270.5prime
CAGTCGACATGCTGATGTTATTCGTAGTGGAACTGCTGGTTCTACTGGCC
AGTTCATCGGTCCTCTCCATCGAGGTGGACACCGAACTGGGACGGGTGCG
AGGAGCCAATCTGACCTCCAGATTGGGTGTCAACTTTCATGCCTTCCGAG
GCATTCGGTATGCAGAGCCACCTCTGGGAGATTTGCGATTTGTGAATCCG
CAGCCAGTGAAGCCCTGGTCCCCGAAAATCTTCGATGCTAGCGAGGATGG
ACCGATGTGCCCGCAACCGTGGGACAATATGACCGATGTATCTGAGGACT
GTCTGAGACTCAATGTGTATACAAAGGATTTGAAGGGCCGCCGACCTGTG
ATCGTGTTCCTGCATCCCGGCGGATTCTATGTCTTCTCTGGACAGAGTAA
ATATCTAGCAGGACCGGAGCATTTTATGGATCGTGATTGCGTGTTGGTAT
CGCTAAATTATCGGCTGGGTAGTTTGGGATTCCTGGCCACCGGAAGTAAG
GAAGCTCCTGGCAATGCTGGTCTCAAGGATCAAGTCTTGGCTTTGCGCTG
GATCCAGCAGCACATCCAACGTTTTGGCGGTGATCCCGATAGTGTAACCC
TTCTGGGTTACAGTGCGGGAAGTATAAGTGTAGCTCTGCACATGCTATCG
CCCATGTCACGTGGTCTATTCCATCGAGGCATCTGCATGAGTGCTGCTCC
ATACGGACCAGTTAAGTACAAAGACAATGATCTACAACTGGCCAAACGTC
ACGCTGGTTTATTGAAGTGTCCACAGGAATCCATTGGGGAAATGGTGGAG
TGTATGAGGCGGAAGCCCTACTTGGATTATGTGAGCACTTATAATGGCAT
GTTTGAATTCGGCTGGAATCCCGTGCTCAACTGGAGAATCGTTGTGGAGA
AGATTTTGGGCAGAGCGTTACCTCATCGAAGTCCTTTCAAACAGCTCGAC
GTGCGACTTTCACAAGGTAGCCTCATCACCGGCATACGGAGTTTGAGTCC
TTTCGGGCGCTTTCTTTGATCTGGCGAAATGAAGCATTGTAACCGCTTAA
TAGATGGTAACCTATGCTTCTATTGGCTGTCTGAACAACTCACGCAATCC
GAGCTGCAGTCAGTTCCGGAA
UFO03270.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:32:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4757-RB | 2098 | CG4757-RB | 23..1143 | 9..1107 | 4995 | 97.6 | Plus |
| CG4757-RA | 1729 | CG4757-RA | 23..1143 | 9..1107 | 4995 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:32:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11161229..11162243 | 9..1015 | 4660 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:32:44 has no hits.
UFO03270.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:15:48 Download gff for
UFO03270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4757-RA | 20..1125 | 1..1088 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:51 Download gff for
UFO03270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4757-RA | 15..1120 | 1..1088 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:43 Download gff for
UFO03270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4757-RA | 15..1120 | 1..1088 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:43 Download gff for
UFO03270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11161221..11162243 | 1..1015 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:51 Download gff for
UFO03270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6986943..6987965 | 1..1015 | 98 | -> | Plus |
