UFO03271.5prime Sequence
1128 bp (999 high quality bases) assembled on 2009-02-03
> UFO03271.5prime
CAGTCGACATGCCCGCCGATCAGTTGGCTGAGTTAACCTTGGGTGCAATC
TTTACGTCGGAAAAGAAGGGTAGTGATGAGTCCGGCGATGGCAGTGAGTC
CAAGCCCTTCAAGACCATCCTGCAGGCGATGCGTCATGCGGGCAAGGAAC
CCTTTCCCACGATTTACGTAGACACCAAGGATCCGAATGCAGCGGAGCCC
TACGAGCCGGCTGCCAAGTCCCAGCTGAAGAAAATTCAGAAACTGTTCGT
CAGGGAGTCGCACAAGAATGCCGATAAGCTGCAACGGGAGGCGGAGGATG
CGGAGAAGCGCCAGCAGAATCTGGAGGATGCTCGAAAGGTGAAGATCTCG
GAGGATCCCAGTCTGCCGGTGGCCCGGAAAATTCGAATCTACGAGGGCAC
TGCCAACCGCGACTCGCGTGTCAAGGTCTACGGTTGGGTGCATCGTCTGC
GTCGTCAGGGCAAGTCCCTGATCTTCATAACACTGCGCGACGGCACCGGT
TTCCTGCAGTGCGTGCTAAACGATCAGCTCTGCCAGACCTACGATGCGCT
CACCCTGAGCACGGAAAGCTCTGTAGTCCTGTTCGGTACCCTGAAACTAG
TTCCAGAAGGAAAGACGGCGCCGGGAGGGCATGAACTGAACGTGGACTAC
TGGGAGCTGATTGGTCTGGCTCCGCCCGGCGGTGCCGATGCCATTCTCAA
CGAGGAAGCACAACCGGACGTGCAGCTCGACAACCGGCATATCATGATTC
GTGGAGAGAACACCTCGAAAGTGCTCAAGATGCGATCCGTTGTGACGCAA
GCATTCCGTGGCCACTACGAGGCGCGTGGCTATAACGAGGTGACGCCCCC
GACTCTGGTACAGACCCAGGTGGAATGTGGCTCAACGCTCTTCAAGCTTA
AGTACTTCGCGAGGAGGCCTACCTCACCCAGAGCTCGCAGCTATATCTGG
AGACCTGCCTGCCGGCATTGGGGCGACGTCTTACCATTTCCCAGAGCTAT
CGTGGGGAACAGAGTCGTACGCGGCGTCACTTGCTGAATACACCGCCACG
TTGGAGGGCGAGGGTCCGTTCCTAACTTCGATGATCCGCTGAATCGATTG
GAGGGATCTGTTTGTGTGAACAGTGGTG
UFO03271.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:50:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-asn-RB | 2375 | CG10687-RB | 125..1225 | 9..1110 | 5200 | 98.6 | Plus |
| Aats-asn-RA | 1982 | CG10687-RA | 125..1225 | 9..1110 | 5200 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:50:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19130624..19131686 | 1104..42 | 4850 | 98.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:50:56 has no hits.
UFO03271.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:15:47 Download gff for
UFO03271.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-asn-RA | 115..1231 | 1..1119 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:29 Download gff for
UFO03271.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-asn-RA | 117..1233 | 1..1119 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:31:25 Download gff for
UFO03271.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-asn-RA | 117..1233 | 1..1119 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:31:25 Download gff for
UFO03271.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19130611..19131685 | 43..1119 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:29 Download gff for
UFO03271.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19130611..19131685 | 43..1119 | 98 | <- | Minus |
