UFO03275.5prime Sequence
1146 bp (1019 high quality bases) assembled on 2009-02-03
> UFO03275.5prime
CAGTCGACATGAACATTTACAACAAGTTGCGGGCCAGGGAGCATGGCTAC
GGCAATGAGAGGACCTACGACTTCGCCCTGCGCCGCCTTTCCGTGGCCAA
GGAGGACAGCTGGCGGGGCATCGCGCCGGCCAACTACTGCCCAGACTTCA
ATCCGGAACCGCCGATCTTCTCCGCCAAGTTCGCCAACTGCGATGGCTAT
CGGCACATCCTGGCGATCGCCAACGAGGACGGCAAGATCACGCTGCAGGA
CACCACCCAGCGCAACCACCAGCCGGAGGAGCAGTCCCTGGTGGGCCCGC
AGTGCCACTTCAACGCCGTTTTCGATCTGGAATGGGCACCCGGCCAGATG
CGCTTCGTCTCCGCCTCGGGCGATCACACTGCCAGACTGTGGGAGGTGGC
GGGCTCCGGCATACGCGGCCTGAACTCCTATGTGGGTCACACAAGGTCCG
TCAAGTCGGCGGCCTTTAAGCGCACCGATCCCGCTGTCTTCGCCACCGGC
GGCCGTGATGGCGCCATTCTCATCTGGGACATCAGGGCCAATCTCAATAT
GGACCTCACGTCACGCGTGGACAACTGCATCTACAGCGGTCACACGGGCG
GACCGGGCACGCCAGTCTCACAGCGCAAGCAGCGCACACGCACTCCCAAG
ATGGCCGGAGGAACCACCTCGAGCAGCATCACTGGCTTGGCCTTCCAGGA
CAACGATACGTTGATCTCCTGTGGTGCCGGTGACGGAGTCATCAAGGTGT
GGGACCTGCGGCGCAACTACACAGCCTACAAAAAGGAGCCACTGCCCAGG
CACAAGCTGCCATATGCCGGCAGCTCCACCTTCCGTGGATTCACCAACCT
CATTGTGGACGCGTCAGCACGAGGCTGTATGCCAACTGCATGGACACACC
ATCTATTGCTACATCTGGCTCTACTCGCAGCGCCGCTGGCGTGCTACAAG
GACTCCTTACTCCACGTTCTACATCAAATCCTGCTCAGCCCGGACGGCAG
TATCTTGCTGAGCGGAAGCAGCGACGAGCGGGCTACATCTTGGAACCTGA
CACGCCCGAAGGAGCCGCTCGTTGCACTGACCGAAACACACAGGGGGAGG
TAACCTGGCGTGGCTGGGGCCTCCAGCCACAATTGCCAATGTCACT
UFO03275.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:20:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)dtl-RA | 2653 | CG11295-RA | 159..1293 | 9..1137 | 5105 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:19:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23702951..23704043 | 51..1137 | 4510 | 96.4 | Plus |
| 2R | 25286936 | 2R | 23702635..23702678 | 9..52 | 220 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:20:00 has no hits.
UFO03275.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:03:00 Download gff for
UFO03275.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)dtl-RA | 148..1301 | 1..1145 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:16 Download gff for
UFO03275.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)dtl-RA | 150..1303 | 1..1145 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:11 Download gff for
UFO03275.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)dtl-RA | 150..1303 | 1..1145 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:11 Download gff for
UFO03275.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23702626..23702677 | 1..51 | 92 | -> | Plus |
| 2R | 23702952..23704053 | 52..1145 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:16 Download gff for
UFO03275.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19590149..19590200 | 1..51 | 92 | -> | Plus |
| arm_2R | 19590475..19591576 | 52..1145 | 97 | | Plus |
