UFO03277.5prime Sequence
1155 bp (1034 high quality bases) assembled on 2009-02-03
> UFO03277.5prime
CAGTCGACATGGAAGCGAATGAAAGTGCGATGCCAGGAACGGACAAATCC
CAAGCTTGTCGCACCAGCGGCGATGGCATGGAGCAACCGGAAAACAGTGG
AGCGGCCAAAACAGAGAGCGAAATCCCAGCGAGTGCTGATGTGGACAACA
AGGTAAAGAGGCCACAATTATCGCGAAAAGACAGCTCCGTTGTCCAGGAG
GCCGTCATGGGCAGGAAGACATCAACTAGTAGCGGCCACTCCTCAAATTT
GCCCCTTCCTGGCTTGCATACCCTGTACAGACGACCCGAGAACGTCACCC
GGAGTTTGGCGCCCGTTGTGCCCAAGGGGGAGCTGGTCCAGATGCGGCCA
AGACTGGTCACCAGCGCGGACTCGCTGCCCGAACATAAGAAGACCAAGGC
GCCCAAATTCGTGCCCTACGAACCATATCCGGGTGCCGTGAATCCCATGA
TCTCTGAGCCAACGAATAAACACAAAATCCATCGGGATAAGAACAACCTG
GACATTGCGGTGCTGGTGGATCAGGTGTCCACGCTGCGCACACAGGAATT
GGAGACTGAGACAACGGATATTAAAGAAACAGACACAGCCAGTAGCCATG
AGGTAAACTCACTTAAAGAGGAGCTGGCCAAGATGCGCGATGAACGCAAT
TACTTTCAAGCCCAGTATAAGTTCCAAACGCAGGTGAATAGCGAGCTGAA
GAGCCTGCTGGTGGCCTCCGTGGGCGAGGATCTGCAGACACGGGTTAATC
TCCTCACCGAGGACAAACTACAGCTGGCCAGAGCTCTATTGGACACTGCC
AACAATTTGACCACCCACACCGAGCAGATTGAGTTCCTGGCCGGCCAGTG
TGAGGTCTGGCGGTCCAAATTCCTCGCCAGCAGCGTTATGGTTGAGAGTT
AGCCCGCTGGAAAGCCGATCTCACGCAGAAGATCAGCTATTGAACGAGTC
AACGAGCACTGCTTCATGCCACCCATCAGATCCGCGAATTCAGCTAGATA
TGCTTAAGCACTGAAGTTCCTGGCAAGATTCGTTTCGTCACTGGCCGCCA
CCGATGTATCAGCCTAGTGCGAAACTTTAACATTCTCCACGCATGGTCCT
GCCACTGGGCTGGCATTCCGGAGGAAAACCTTAGGTGTCCAGCGCCAGGC
AGTGC
UFO03277.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:19:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9356-RB | 1519 | CG9356-RB | 113..1269 | 9..1148 | 5205 | 97.6 | Plus |
| CG9356-RA | 1578 | CG9356-RA | 172..1328 | 9..1148 | 5205 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:19:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9402981..9404039 | 1058..9 | 4855 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:19:57 has no hits.
UFO03277.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:02:58 Download gff for
UFO03277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9356-RB | 93..1257 | 1..1155 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:13 Download gff for
UFO03277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9356-RA | 167..1331 | 1..1155 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:09 Download gff for
UFO03277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9356-RA | 167..1331 | 1..1155 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:09 Download gff for
UFO03277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9402874..9404044 | 1..1155 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:13 Download gff for
UFO03277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5228596..5229766 | 1..1155 | 96 | | Minus |
