UFO03281.5prime Sequence
1103 bp (982 high quality bases) assembled on 2009-02-03
> UFO03281.5prime
CAGTCGACATGTCGGATGCCCACTTGGAAGCACCGCCTTCGGTGCGACTA
ACCAACGATGACTTCCGCAAGCTGCTAGCGACGCCCCGAGCTCCTCCTCC
TGGCTCCGGGACGAGCAGCACCTCCGCTGGAGGATCTCTGGCCACTGCTA
CCTTTGCCACGCCCTCCACCGCCCCCGGCACGACAGGATTGAGTGGCGAA
AAGAAGAAGGGTCAGAGCAGCAGCGAGCGGAATGATCTGCGTCGCAAGAA
AAAGAACTTCTATGCGGCGCTCAAGAAGCAGGAGGATGTGAAGCTGCAAG
AGCTGTCCGAGAAGTACAGGGACCGAGCACGAGAACGACGCGATGGTGCC
AATCCAGATTACGTGAACGTGAGCACGCCGGGACACGGAAGCAGCACCAA
TGCGTATCGAGCTGTAGCGCCAGATATGAAATCCGGAATCGATGCCCAGG
AGCGAAGAAGACGTATCATTCAGGAGTCCAAGTTCTTGGGTGGAGACATC
CAGCATACGCATTTGGTGAAGGGTCTTGATTACGCCCTTCTGCAAAAAGT
GCGCTCCGAGCTGCACTCGAAGGAAGCGGAAGAGGAGGAGATTGCCGCCG
CTGTGGCAAGGGAAAAGCTCGCCGAAGCAGCTGCCGCCGCTGAGCAATTG
GAAGCGGAACGCCGCGAGTCGGAGGATATTAATGCAATCAATGGTGCACT
AGCGCGCAATATTTACAATCTAGTGCAGGCAAGGCGTTCGAAAGAAGTTC
CCCGCAATGAGCTATTTGCTCCAGGACGGATGGCCTATGTGATCGACCTG
GATGACGAGCTAGGGGAGTCGGATATTCCAACCACACTGAAGCGCTCCAA
GTTCGAGGTGCCGGTGTCACAAGAGGATGTTGCCACGCTGACCACCAATG
ACATTGTGATCAACAAGCTGTCCCAAATCCTGAGCTATCTACGTGCCGGT
GGTCGCACAGAGAACAAAAAGCGCGACAGACAAACGCTGTCTACGAAAGA
GGTGGAAATCTCTGGATCGTCTAGCATGGTGCTCCAGTCGCACGCCACCT
CGTCCTCATTCGAACATGGGAGGAATCAGCCTCCTGGGCGATATATTCTA
CGA
UFO03281.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:46:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| beag-RA | 1882 | CG18005-RA | 85..1201 | 4..1103 | 5040 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:46:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9064041..9064994 | 957..4 | 4755 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:46:29 has no hits.
UFO03281.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:03:07 Download gff for
UFO03281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18005-RA | 102..1210 | 1..1093 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:12 Download gff for
UFO03281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| beag-RA | 83..1191 | 1..1093 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:28:38 Download gff for
UFO03281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| beag-RA | 83..1191 | 1..1093 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:28:38 Download gff for
UFO03281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9063888..9064996 | 1..1093 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:39:12 Download gff for
UFO03281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4889610..4890718 | 1..1093 | 97 | | Minus |
