UFO03284.5prime Sequence
1100 bp (998 high quality bases) assembled on 2009-02-03
> UFO03284.5prime
CAGTCGACATGACTCAGAGTCCGCTTAAGTTGGCCCCCATTTTGGAGGCC
CTAGTTCTGATAGTGGTCCTAATCAACCAAGTGCAGTGCGGTGAGAATGA
TATGAGACAAGCGCGCATAAGGCAGTTTCTGAGTGAGAACCAGCCCCTGG
CCCAGCACCATATCAAGCACAATCGGCCGCCGGGTCCCGGACAACTGCCC
CGGATAAGATCGCGATCGGATAACCTGGCCATGCTTTCTGGTGGCTCCAA
CAAGTTCTTGCGGTCGCCGCAACCTGCCACTGCGCAGCACATCATGCGTC
GCGAGCAGTTCGGGAACTTTCCTGCGAACGACCAGCTCAGGAGGTACCAG
TTCGACCAGAGTCAGCAGGGCAGATTCGCCCACGTAAAGGACACTCCGGT
GCTAGATGTGGGCAAAAACCAGTTCCCACTCCAGTATGTCTCCGAGCAGT
ACATTCAGAACTTCAAGTCCTCGCCGCGCTTCAATGGCAATGTGATCATG
AAGGACACCAAGCCAGTGTACGCACCCATCCAACAGCATGCGATTCCCGT
CCAGGCCTCCCAGTACCTGCACTATCCCAAGCTCTTCGGACAGCAGGGAT
CTCCCAGTTTCAGTGTTGTCCCTACCCAGCAAACTGCTCTCCAAAACAGC
CAGTTTCCCCAGGATCCAAATAGCTACTCTGTCTACGAGGATACCGATAT
ACCTGCGAAGCAGGCGGTAAACTTTCGCCAGGCAGTGCCACCACCAAAGG
AGTCCAGGGAGGCGCAGGACTACCTGCAATTCATGAGCACCAACGAGTAC
TTCCTGCCCAAGAGGGATCCTGACTTCAAGAAACTGGACGCCGAGCGGGA
CCAGCAGAAGCTGCTCCACCAATATCCACAGCAATACAGACAGCAGCAGC
AGCAGCAACTGTATCAGCAACACAGCAGCAGCATCAGCACGCAGCACAGC
AGCCGCAGCAGCAACAAGCGCTGCAGCACATGTTCCTACAAAACTGCTGG
ACTAGACACTCAGTCTTCTTCAGGTACAATGAAGCCCATACAGTGTCCGA
CTTGTTCTACCAGCAGAATCCCTCCTGGCGAATTCCGCAGGTGTTCGCGC
UFO03284.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:55:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7173-RA | 2439 | CG7173-RA | 467..1565 | 9..1099 | 5105 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:55:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21556662..21557760 | 1099..9 | 4870 | 98.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:55:24 has no hits.
UFO03284.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:03:03 Download gff for
UFO03284.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7173-RA | 462..1560 | 9..1100 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:21:51 Download gff for
UFO03284.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7173-RA | 467..1565 | 9..1100 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:45:47 Download gff for
UFO03284.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7173-RA | 467..1565 | 9..1100 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:45:47 Download gff for
UFO03284.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21556660..21557760 | 9..1100 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:21:51 Download gff for
UFO03284.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21549760..21550860 | 9..1100 | 98 | | Minus |
