UFO03292.5prime Sequence
1082 bp (940 high quality bases) assembled on 2009-02-03
> UFO03292.5prime
CAGTCGACATGTCAAAATTGGACCAGGACCCGAACGCCTCACTGAGCATC
ATGGAGCAAATCAAGCAGCTCATCCGCCCGCCGCCCAACGAGGACGAGAA
GATGATGCAGCGGTCCACCAACACGAAGCATCCGTACTACAGGCGCCCGG
GCAGGGGCCACAACCACGACTATTGTGACGCCTGCGAGGAGGGCGGCAAT
CTGCTGTGCTGCGATCGATGCCCCTCCAGCTTCCACCTGCAATGCCATGA
TCCACCGTTGAGCGAGGAGGACATACCCAGTGGCCAGTGGCTGTGCCACA
GCTGTCGCATGAACAAGCTCTCCCAGCCGCCGGCCTCCTCATCCAAGGCC
AGTTCCGTGGAGCGTGTGCCTTCGGCGGGCAGTGGCTCACGGGCGAATAC
TCCATCGTCTGGCGATCTGGAGTCCATACCGCTGAAGATCCGCAACCTGC
GCAAACGCAGCAACAGCGAACGCAATAGCACCGAGAAGCTGCTGGCCAAA
ATGCCGATGTCCATACAGCGCGCCCTCGATCCGAACAAGAAGCCAACGCC
GCTGGACGATGTCATCAGGGCGGCCACCATGATGAATCCGCAGCAATTCT
CGCTGCCGCCGGAGCTCGAGCTGCACACCCAGTTCCCGGGCAATGGCAAG
GTGCAACCCGTACAGCAGACGCATCCGCCGAGCGGAAATGGCGGTAATCG
CAGATGCGCCGGCAATCAGCGACGCAACTCCAAGCCGTTTGAGCTGGATG
CCCAGGGACTGGTGCCGCTGCCCGCCAAACCTGTTTCTACTGCACGCGCT
CCTGCAAACGGGCGCCGCTCATCTCCTGCGACTACTGTCCGCTCTACTTT
CACCGGATTGCCTGCATCCGCACTGACGGCACTGCCAGCTGGATTGTGGA
TGTGCCCCATCATGCCGAGAATTTATCGATGCCATTATGACATTAGCATT
TCGGCCACGGAGCGGGTGCGTCTCTGGAATCGCTTCAGATCCACTGACCA
TGAATGTCAAGCTTGACTCATCGGCTGTCAACTGCGCATCCGCCCATTCC
GACAAGATAATCTGCGTGTTCGGCACACATCA
UFO03292.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:45:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3815-RA | 3232 | CG3815-RA | 118..1209 | 9..1081 | 4770 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:45:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6295964..6296644 | 248..924 | 3175 | 99.1 | Plus |
| X | 23542271 | X | 6295708..6295900 | 55..247 | 965 | 100 | Plus |
| X | 23542271 | X | 6295506..6295553 | 9..56 | 240 | 100 | Plus |
| X | 23542271 | X | 6296709..6296768 | 928..986 | 220 | 95 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:45:40 has no hits.
UFO03292.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:08:13 Download gff for
UFO03292.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3815-RA | 116..1145 | 9..1025 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:38:53 Download gff for
UFO03292.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3815-RA | 118..1147 | 9..1025 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:00 Download gff for
UFO03292.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3815-RA | 118..1147 | 9..1025 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:00 Download gff for
UFO03292.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6295506..6295553 | 9..56 | 100 | -> | Plus |
| X | 6295710..6295900 | 57..247 | 100 | -> | Plus |
| X | 6295964..6296648 | 248..927 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:38:53 Download gff for
UFO03292.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6189539..6189586 | 9..56 | 100 | -> | Plus |
| arm_X | 6189743..6189933 | 57..247 | 100 | -> | Plus |
| arm_X | 6189997..6190681 | 248..927 | 98 | -> | Plus |
