UFO03295.5prime Sequence
1126 bp (998 high quality bases) assembled on 2009-02-03
> UFO03295.5prime
CAGTCGACATGTCCATGCAAAAGGCCAAAGTCATCGACCAGAAGGAGTAC
CTCAAGAAGTACCTATCCGGCGACAAGGAGAAGAAGAAGAAAAAGAAGGA
GAAGAAGCACAAAAAGAATTCGGCCAACACCAAAGTGAAAATCATCGATG
ACGACGCCTACGAAAATGATAATCTGGAAATGGACGAAGATCTACTGCTG
GGCGGCGAGGATGCGCCTCAAATTGTGGGCGAGTACATCGAAGAGGATCC
CAATGTGCGCAGCAAGTGGCGCAACATTGCCGTCAAGGATGAAATCAAAG
AAGAGCACGAGGAATCCTCGCCAGCAACTGGCATTCGCATCAAACAGGAG
CCCTTGGATGAGGAGCAGGAGATGTGGGGACGCAAGGCGACAGTTGTTAA
GGTTAAGGATGAATTCTCACCATCCAGACGAAGTTCACCCGTCAGAATTA
AGCAAGAAAAACGCAGCAGCTCTAGGGATTTAAGCCCAGCGAGATCGAGT
AAGCCAGCAAAGCGAGAAGAGAGTCCTCAAAGGGGGCGAAGAAGGGCGGG
AAGCTCAGATCAGAGTCCCACCAGACGAGGGCGAGATGGCGATCAGTCTC
CGCCACGCCAAAAGCACAGGGATTCCGATCAGAGTCCACCCCGAAAGGCC
AGGAATGGCAATCAATCGCCAGTCAGAAAAAGGCGGGATTCCGACCAAAG
TCCGCCAAGAAAACGAACGGGAAAAGCATCACCCACTCGAAGGAGAAGGG
ATTCCGATCAATCGCCACCCAGACGCCGCAGAAGTAACTCCGATCAGAGT
CCGCCAAGGCGACGTAGAGACAAGGATTCAACTCCGCCCAGAAGGAGGAA
AGATTCCGATCAAAGCCCACCTCGAAGGCGTAAAGCAGACGATCAATCTC
CGGTGCGAAGGGAAAGGAAAGACTCCGACCAAAGTCCGCCTAGGAAACGG
AGAGACAATGACCAGTCCTCCAGTGCGAAGAGGCGGGATTCAGATCAAAG
CCCGCTCCGAAGACGCAGAGATGACAGCAAACGCCGCCAAGGAGGAAAAG
AACTCGATCAAGGCCGCCAAGAAGACCAGGATGTTGATCAATCGCCACCG
CGCAGAAACCAGACACTTCCAACCAC
UFO03295.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:11:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13625-RA | 2094 | CG13625-RA | 81..1186 | 9..1108 | 5270 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:11:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24583975..24585080 | 1108..9 | 5100 | 98.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:11:20 has no hits.
UFO03295.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:03:06 Download gff for
UFO03295.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13625-RA | 54..1169 | 9..1119 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:12:58 Download gff for
UFO03295.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13625-RA | 81..1196 | 9..1119 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:02:34 Download gff for
UFO03295.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13625-RA | 81..1196 | 9..1119 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:02:34 Download gff for
UFO03295.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24583965..24585080 | 9..1119 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:12:58 Download gff for
UFO03295.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20409687..20410802 | 9..1119 | 98 | | Minus |
