UFO03296.5prime Sequence
1036 bp (872 high quality bases) assembled on 2009-02-03
> UFO03296.5prime
CAGTCGACATGGACAGCAGGGAGGAGAACGCCGTGTACGATGACATGAAC
CTGTACATCGCACCGCAGAGCTTCATCATCGAGCCGAATGGAGGAGATGA
GTTGCTGGTCATCGGGCGCCACGACAAAGTCACCAGGGTTCAGCCAGCGA
GCGGAGGTCTTGTGGCCAACCTTCGCCCCACCAGGAGGATTTGTGGTGTG
CTGGGAACCATTCACCTACTGAGCTGCGACTACCTTCTGGTGGCGACCCA
CCGCCTCTTCGTGGGCGTGCTCAATGGCGCAGTTGTGTGGAGATTAGCGG
GCTATGACATCATACCTTACATTCCGAATTCCTTCCAGCGCAAGGAGAAC
GAAAACTACTTGCGACTGCTACGCCAGACACTTGACACCAAGTTCTTTTA
CTTCTCCTACCGCTACGACCTTACCAATTCGCTGCAGCGACAGCGGGAGG
TGGCACAATCGCGGCCTGAAGTATCCGGGTTGCTCCAGCGCGCTGAGCAG
CGATTCGTTTGGAATGGCTATGTGCTGCGGCAGTTCAACTGCGATAAGAT
GGAGAAGTTCCAGCTGCCACTCGTCCTGGGCTTCGTGTCTATCAACCAGG
TGCAGATCAACGGGCAGACATTCTTCTGGAGCATCATCACCAGGCGTTCC
GTGCAGCGGGCGGGCACACGGCTCTTCTGCCGAGGCAGCGACGAGCAGGG
CCATGTTGCGAACTTCGTAGAGACCGAGCAAATAGTGTGTTCAACGGGCA
GCTGACTGGATTCGTGCAGACACGATGCAGCATGCTCTTCCACTGGCACC
AGCTGCCCAATTTGCGCTATAAGCCACGACCCGTTCTGGTGCCGGGCATG
ATCATTTGGCCGCCTGCGTGCTCACTTTAATGACAGATCCGGCTGTATGC
AACATGTGCTGTGATCTAGTGATCACAAGTGCCGAGCGAGCTCGAGCGAC
TATGCCCCGCTGCTCGAGAATGGAATCCACAGGTGCGATGCAGTCGTCGA
CTCACAGCGAATGCCGTAGATGCCCTGCACGGCTGA
UFO03296.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:21:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sac1-RB | 2327 | CG9128-RB | 166..1209 | 8..1027 | 4450 | 96.4 | Plus |
| Sac1-RA | 2365 | CG9128-RA | 204..1247 | 8..1027 | 4450 | 96.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:21:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1248290..1249185 | 8..899 | 4190 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:21:24 has no hits.
UFO03296.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:08:18 Download gff for
UFO03296.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sac1-RA | 205..1143 | 8..935 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:58 Download gff for
UFO03296.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sac1-RA | 204..1142 | 8..935 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:50 Download gff for
UFO03296.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sac1-RA | 204..1142 | 8..935 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:50 Download gff for
UFO03296.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1248290..1249228 | 8..935 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:58 Download gff for
UFO03296.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1248290..1249228 | 8..935 | 98 | | Plus |
