UFO03312.5prime Sequence
1051 bp (927 high quality bases) assembled on 2009-02-03
> UFO03312.5prime
CAGTCGACATGGAGTTCCTTAGCGCCCAGTGCGCTGCCCGTTCGGCGGGT
CCGGCAAATACGCTGATGTCCTTGCTCCTGTCCACGCTGATTACCAAGTA
CTGCGATTTGAGCGGACAAAATCAATGGCCAGAGGACAAGGGCGATTGGC
TGGAACAGGCTGGTGGCTTCAAGCATGACTACGACTTTATTGTGATTGGA
TCGGGTACATCGGGCGCAGTGGTTGCTGGTCGTCTGGCCGAGGTAAAGAA
CTGGAAAGTGCTGCTCCTGGAGGCCGGTGGTGATCCACCAATTGAGACGG
AGTTCGTTGCCTGGCACATGGCCACCCAATTCTCCGAATGGGATTGGCAA
TACCACTCGAAACCGAACGGACGTGCGTGCATGGCGATGAAGGGCGAAAG
TTGCCACTGGCCGAGGGGCAAAATGTTGGGCGGCACGAATGGAATGAATG
CCATGATCTATGCCAGAGGAACGCGTAAGGATTTCGATGACTGGGAAGAG
AGGGGCAATCCCGGATGGGGCTACGATGAGGTGCTGAAACACTTCCGCAA
GGCCGAGGATCTGCGTTCCACGCGACCGGACTACAAGCCCGGCGATCATG
GCGTCGGTGGACCAATGGGACTGAACAATTATGTATCCGACAACGAATTC
CGCACTACCATACGCGCCGGCATGCAGGAGATGGGCTACGGCAGTGCTCC
GGACTTTACCGAAGGCTCGTTTGTGGGTCAAATGGACATCTTGGGCACTC
AGGATGGTGGTCGTCGTATCACCACCGCCCCAATCTCATCTGAAGAAGAA
TACGCCAATCTGCACATCCTGCGACATGCTCACGTCAAGAAGATCAATCT
GGATCGTAACAATCGAAGCGAAAGTGTGACCTTTGTGCATCGCGGCAAAG
AAGTAGTACACGGTGAGGCCCAGATAAGGAGGTCATCGTGTCCGCCGGTG
CCATTGGATCACCCTCAAAATCCTGTTTGCTTTCAGGCCATCCGATCCCG
CCGATTCACTTGAAGAAGCCTGGAAATCTCCCGTGAAACTCTGACCTTTT
T
UFO03312.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:23:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9512-RB | 2221 | CG9512-RB | 149..1170 | 9..1040 | 4715 | 97.9 | Plus |
| CG9512-RA | 2113 | CG9512-RA | 149..1170 | 9..1040 | 4715 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:23:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14903984..14904936 | 963..9 | 4475 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:23:53 has no hits.
UFO03312.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:07:53 Download gff for
UFO03312.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9512-RA | 134..1169 | 1..1051 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:41 Download gff for
UFO03312.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9512-RA | 142..1177 | 1..1051 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:00:08 Download gff for
UFO03312.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9512-RA | 142..1177 | 1..1051 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:00:08 Download gff for
UFO03312.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14903990..14904940 | 1..957 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:41 Download gff for
UFO03312.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14798023..14798973 | 1..957 | 98 | | Minus |
