UFO03325.5prime Sequence
1055 bp (944 high quality bases) assembled on 2009-02-03
> UFO03325.5prime
CAGTCGACATGAGCAAGATTCCAGGCAGCAATCTGGAGTTCGTCCGCGAG
GAGGACTTCGTGGAGTACTACATCTTTCCCAAGATCCCCGACAACGTACA
GGATGAGGGCGCGCTGCGCAAACTGATGCTTCAGATCCGCAACGAGATCT
CGGCCATTGTAAGGGAAAAGTCCTTAGAGCGCAGCTATCTGTGGCACAAG
GACGAGTTTCAGCTTCAGGTGAGGCTGGGCGGCGCCGAGGAGCGCCTGCT
GAACGAGGAGACAAACCCGGAGGAGGAGGCGGAACTGGGCGACCTCCCAC
CGCACTTCCACGGCGTAACCCACTATGGCGACAACATCAGCGACGAGTGG
TTCGTTGTCTATCTGCTCACGGAGATCACACGTGCACGCGGCGACTGCAT
TGCACGGGTGAGCGATTCGGATGGCGAGTTCCTGCTCATCGAGGCGGCGG
ACGCCCTGCCCGACTGGGCGTCTCCGGAAACGTGCGAGCAGCGCGTTTAT
CTGGTCGGTGGTCACCTGCAGCTTCTCCAGAACTCCGCCGCCAGCAGCCA
GGACAAGCCACTGACCATGGCCATGGCTGTGCAACGTATACGAATGAATC
CCACCCTGTACCGCTGCTCGCAGGAGATACAGTCGTGCATTGACGCGCGG
CTTAAGGAGTACCAGATCGCTCAGCCGCACTTCTCCATTCATCGCCAGGT
GCTGGAGCTCCCGCATAGCGCTGCACAGCTTCTGAAACAGAAGCCAAGGC
TGCTCTCCTCGGCGGTTAGGGCTTTCTGCGAGCGGGACTCGCTGGACATC
AAGGCACTTCGCACCATGCGATATTTCCCACCGGGAGGCACACGCGTGCG
CACCAACGTGCGTTTCACCCGCTGTCTGTACGCCATGTTGTCGCACCAGC
AGTATCTGGCCGAGAGAGACTCGGCTGCATCTCACGGATCCTGTATCGAG
CGACGATATAGACACTATTGGCTGAGCTGCAGTGACTGAGATCTGCACTC
AGCAGCGGTGAGCACAGCTGAGACTCTTGCTGGGATCGATTGCGGACTGC
TGACA
UFO03325.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:31:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ecd-RA | 2204 | CG5714-RA | 83..1023 | 9..947 | 4595 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:31:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 2264762..2265423 | 947..288 | 3150 | 99.1 | Minus |
3L | 28110227 | 3L | 2265495..2265775 | 289..9 | 1405 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:31:11 has no hits.
UFO03325.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:07:22 Download gff for
UFO03325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ecd-RA | 34..994 | 2..960 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:53 Download gff for
UFO03325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ecd-RA | 80..1040 | 2..960 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:55 Download gff for
UFO03325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ecd-RA | 80..1040 | 2..960 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:55 Download gff for
UFO03325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 2264729..2265422 | 289..972 | 97 | <- | Minus |
3L | 2265496..2265778 | 2..288 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:53 Download gff for
UFO03325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 2264729..2265422 | 289..972 | 97 | <- | Minus |
arm_3L | 2265496..2265778 | 2..288 | 98 | | Minus |