UFO03328.5prime Sequence
1144 bp (1039 high quality bases) assembled on 2009-02-03
> UFO03328.5prime
CAGTCGACATGGGAACCTTGGGCAATCAGTTCATCCTCTCGCGGGAGCGT
CGCCGGTTCGGGAGGCAGTGCCTCTTCACAGACCGCAACGAGATGATCCT
CAGTGTGCAGCCGAGTGGACGGTTGCGCCTCAAGTACATACTGCGCAATC
CGATCAACGAACGGACCCAGCTGAGCGAACAGTATGCAGCATCTTCAGTG
TTGACACACAACGTGACCCTGGATTCCCATGGCTTGAATCACTACGAAGG
CGGCTGGAACGTCAAGGAGGTGAACATTATGGACGAGGAGTCCACAATGC
GCTATCGCAAAAAAGTCGAGCGTGATGACTCCTGGGGCATCGAGGTGAAC
CAATTGATGCACGCCGCAATGGACATCAGTTCGGCCAACAATGCTGTCAA
CATCTACGAGGACTTCTTTGTGGATCTACCGGAGGATTTGGGCCGCGGCA
TCAGCATGAAGATCGCTGCCAGGGGTACCCATGTCTTTCATGATCTGTGG
ATCCCATCGCGTAGGCTGATGACGTGCGAATGGCTAAACAACGATCCCAA
TCAGTTTCTCCTGTTCTATTCCAATCGAATGAGCCTGACACCGGACTACA
CAAAACAGCTAAACACGCTGCCCGATTTTGGCAACGATAATCCGCATGCA
TTCTACATTTGGAACTTGGATGATGCCACCCGACCGGCTGCCCATTACGA
TTCTAGGAGAGTCGTACGGGTTGCCAAGGTGTGCCTGCGGGATGAGAGCT
ACATGGTGGGTGGACTACAGGAGGGTCAGTCGGCTTCTGGCTAACCGAGA
ACCAGGGTGGTCCCAAGAGCATGTGTCCCCTGGAGGCGTGTCATCGCGAG
GGCACAACGGCCATCTGCTGGGTGCACTCGAAACTCAACACTGAGTTTAC
TCAGATCACTGGATGGGTCCATCAAGTACTGGGATACCCGGGATCTTCTT
ATGCCGTTCATGAGTGCTGGCCGAACCGGACCCCAGAAAGTCAAATCGCC
AGGATGCACCATGGCGTTACTTTTCTCGAGTCGAGTACCCATACCAGTGC
GCTTAATATTCTGCCACGAAATGGTACTTGTTCGTAGGCAATCGCAAAGC
CACCACTTCGCAAGAATACCTATCGGTGTCTGCCCATACACTTT
UFO03328.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:13:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10859-RB | 1989 | CG10859-RB | 24..1167 | 9..1144 | 5125 | 97.3 | Plus |
| CG10859-RA | 2209 | CG10859-RA | 244..1387 | 9..1144 | 5125 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:13:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13397307..13398421 | 1112..9 | 4835 | 97.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:13:04 has no hits.
UFO03328.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:07:16 Download gff for
UFO03328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10859-RA | 244..1364 | 9..1119 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:14:01 Download gff for
UFO03328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10859-RA | 244..1364 | 9..1119 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:03:33 Download gff for
UFO03328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10859-RA | 244..1364 | 9..1119 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:03:33 Download gff for
UFO03328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13397301..13398421 | 9..1119 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:14:01 Download gff for
UFO03328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13397301..13398421 | 9..1119 | 97 | | Minus |
