UFO03333.5prime Sequence
1128 bp (1035 high quality bases) assembled on 2009-02-03
> UFO03333.5prime
CAGTCGACATGACACCTAAGTCGATCCAAGATGACACCTATGTGGAGCAG
TTCATGAAGTACAACCTAAATGTCATGCACCAAATGACTAACTTCACTAC
AATGGTAGCGAAGAGCACGACCAGATCCCGCACGCGGTCTAGTGTTCGGG
CCGGAATAGGCGGCAATAAGCAGTCCATTGACGACCTGATGAACGGGATA
CTTTATGAAACTATTAACTGGGAACCGTACAGCACTGTTGAGGCTCTCGA
AGAGGCGTACGAGCCAAAGCCGTATACCAAGTCCTTTTTAAAGATCACCT
TACGCAAGTCTGACTTCTTCGAAATTCACAGCCAGACGCAGACGACGGTG
GCCAAGGGATCGCCCGAGGGCGACGATGCGGAGCGAGACAACCGAAACTA
CGAGTATCTGACAATAGGGAAAGGCAAAATTCGCCGGCGCTCAGACAATG
ACGCTCAGACAGATACTCTGCTCTTCACCACTCGGGCAGTCAACACCATC
CTCATAACCAAGGCCACCGTCAGCTCTTACGTTTCCAACTTTGAGATGTA
CGACACGCTGAACAATATCACCAAGGAGTTCGCAACAGCCACTATGAGTT
CGGTAAAGGACCTGACCTCGGCTCTAGCGCAGACGGAGGATGCGGATACC
TTTGAGGACGACGAGGCCGTTGCCGAAAAAGACAAGGTCAGCAGCCAGAT
AGAGCGCCTGTTCCGGAGCCCCGAGTTTCGCAACGCCATCATGTACATGG
GCCGCACGCTCTCGAGCAACACAAACGAGGCGGGGTTACGACGCTTCCGT
AACTTTGACCAGGTGGAACGCTGGAACGCGGAGGCCGAGTACGTCTACTC
GATGAACTTGCTCTTTCGGCTGGTACCGGAGCCCAGCAAAGACGAGCGCA
GGCCGTAAGCGACATTGATTTCTGCCGCAGCAATGGTGACATCCTGCTGT
AGCCTACGGACTGTACTCATTTTCCTCACAGCACGTACCGACTCGGCAGC
GTTTTCCTGGGGAGCATAAAAATCCAGCGAGCCGGAGCGCGCATACTACT
ACGATGGTGCAGTACGCATAACTTTCTCGCCATCTTGCATCTGCTCGCCA
TTGTTTGTACAACGCGCAGTTGATCGGA
UFO03333.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:21:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dic61B-RB | 2642 | CG7051-RB | 459..1578 | 9..1114 | 5140 | 98.1 | Plus |
| Dic61B-RA | 2616 | CG7051-RA | 433..1552 | 9..1114 | 5140 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:21:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 150926..151791 | 1056..197 | 4035 | 99.1 | Minus |
| 3L | 28110227 | 3L | 151848..152036 | 197..9 | 945 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:21:02 has no hits.
UFO03333.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:07:07 Download gff for
UFO03333.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7051-RA | 424..1556 | 1..1119 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:45 Download gff for
UFO03333.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dic61B-RA | 424..1556 | 1..1119 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:38 Download gff for
UFO03333.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dic61B-RA | 424..1556 | 1..1119 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:38 Download gff for
UFO03333.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 150856..151790 | 198..1119 | 97 | <- | Minus |
| 3L | 151848..152042 | 1..197 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:45 Download gff for
UFO03333.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 150856..151790 | 198..1119 | 97 | <- | Minus |
| arm_3L | 151848..152042 | 1..197 | 97 | | Minus |
