UFO03358.5prime Sequence
1106 bp (990 high quality bases) assembled on 2009-02-03
> UFO03358.5prime
CAGTCGACATGGCCTCGAAGGTGCATCCAAGTCCGGGGGCGGCGCGCAGT
GTGTGGGCGTTGCCCCTAACCGCCTCCTCCTCCTGCAACATGGTCGTCGC
GGAGGAGGATGGCCATGCCCACGCCGACGACATCCATTTGGATCATCGAC
CGCATTCGCCGCCATTAACGGGTCGCGGCACGGACGGTGGACACGGCAGT
AGCGGCGTCGAGGACCACGAAAATGTGCTCCTCTTTGAGGGGCTCGATGG
TGCCACCACCGTGAGTTTGGACGACATCTTCGATATTATCAAGAACGGAG
AGGTCAGCGAGGTGGAGAATCTCGTGGACAAGTTCGGCATGGAGTGTCTG
TCGGCCAGGGATCGTCATGGCTACACGCCAGCCCACTGGATAGCTCTCAA
CGGCAATGTCCAGCTGATGCGATACCTCATCGAACGCACGGCTCCGATCG
ATCTGCCCTGTTTGGGTACGCAGGGTCCACGGCCCATTCACTGGGCGTGC
AGGAAGGGTCATGCGTCCGTGGTGCAGGTCCTCCTCCAGGCTGGAGTTGC
CGTCAATGCGGCGGACTTCAAGGGACTTACACCCCTCCATCTCGCCTGCA
TGTACGGCCGTACTGCAACGGCGGCCTATCTTCTTGGAATGGGAGCGCTG
AACAACCTAACTGACATAAACGGCGATACGGCACTCCACTGGGCAGCGTA
CAAGGGACATGCCGATCTTATGCGACTCCTCATGTATTCCGGCGTTGAGC
TTCAAAAGACGGACAACTTTGGATCGACTCCACTGCATCTGGCTTGCCTG
TCTGGTAACATGACGTGCGTTCGCCTGCTGTGCGAGAGTCCCAGCTGGAT
CTGGAACCGAGGGACAGATGGAAAGACGCCGATCATGTTGGCACAGCTCA
TCAGCACCAGGATGTGTGCGCCTGCTGTACGGCGAGGTGAGAAGAGTCCC
GTTGATTCCCTCAGTCTCGGAAAGTGGGGCTGGCTCTTTGGCGGGGCTGG
AACTCCAAGGACCGCTATCATCCCTCCTCGGGCTACTTGGGGCTATCCAT
GTACTGATCGGTGCATTCCATACTGACATTGGAACGCTCGGCAATGCCTA
ACTGGA
UFO03358.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:27:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Patsas-RA | 2466 | CG6618-RA | 224..1307 | 7..1069 | 4825 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:27:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12102059..12103062 | 1001..7 | 4575 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:27:08 has no hits.
UFO03358.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:15:30 Download gff for
UFO03358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Patsas-RA | 216..1307 | 1..1069 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:47 Download gff for
UFO03358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Patsas-RA | 216..1307 | 1..1069 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:53 Download gff for
UFO03358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Patsas-RA | 216..1307 | 1..1069 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:53 Download gff for
UFO03358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12101979..12103068 | 1..1069 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:47 Download gff for
UFO03358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12101979..12103068 | 1..1069 | 97 | | Minus |
