UFO03361.5prime Sequence
1119 bp (1005 high quality bases) assembled on 2009-02-03
> UFO03361.5prime
CAGTCGACATGTCTCGAAAGAAGTGGTCTTCGTTGGACAAACCGCCCCTC
TCAGATGCAGTGCTTCAAGTGGTGCAGAGCTTCGGCTTCCAGCAGATGAC
GCCCGTCCAGACGGCGGCCATACCGCTACTTCTGGCCCGGAAGGATGTCT
CAGCGGAGGCTGTTACTGGTAGTGGTAAAACGCTAGCCTTCCTTGTGCCC
ATGCTAGAAATCCTCCAGAGACGGCACAAGGAGACCCCGTGGGGCCCCAA
GGAAATAGGTGCCCTCGTCATCTCACCAACCCGGGAACTGGCGCGCCAAA
TCTCCGAGGTCCTAGCCCAGTTTTTGGAACACGAAGACTTGGAGCACCTG
AATCAACAGTTGATTGTAGGCGGCAACAGCATTGAAGAGGACATTGCCAC
GCTGCGTAGGGAAACGCCGTGTATACTGGTGTGCACTCCCGGTCGGCTGG
AGGATCTATTTCAGCGCAAAGGAGATGATCTTAATCTGGCGGCTCAAGTG
AAGAGTTTGGAGTTTCTCGTCTTAGACGAAGCTGACCGCCTGTTGGACTT
GGGCTTTAAAACAAGTGTAAATAACATACTGGGCTATCTGCCCCGCCAAC
GTCGAACTGGGCTCTTTTCCGCCACACAGACTACCGAGGTTACGGACTTA
ATCCGTGCGGGGTTGAGAAATCCTGTTCTCGTATCAGTCAAAGAGAAGGC
ATCCGTAAACACTCCAGCCCGCCTGCAGAACTTCTACAGGATTGTCGAGC
CAGAACTAAAGTTTGTGGCCCTGCTGGAGTTCCTCAGTTCACCCGCCACC
GTTATTGGAAAAGGTAATGGTCTTTTTCCCCACCTGCGCCTGTGTGGAGT
ATTGGGCTGAGGCCCTGCCGCCTCTTTTGCCCAACGCACAGTGCTAGGAT
CCACGGAAAGATGAAAACAGAGGGCCAATGTGTGAGAGTTTCGGACACTC
CACAGGCGTACTCCTCTGCACAGATGTCCTCGCACGTGTTTGATGTACCT
GAGATCGAGGGTAGTGCATGGGAATCCACATCAACTGCCTCAGCCTTGTA
CACCGTGTAGTCGCACGCTCGCAAGGAACGAGGCACGCTCTGGGGTTTCC
TGCAGCGAGAAGCTTATGT
UFO03361.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:33:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9630-RA | 1954 | CG9630-RA | 55..1165 | 9..1099 | 4930 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:33:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8268777..8269842 | 1060..9 | 4575 | 97.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:33:11 has no hits.
UFO03361.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:16:29 Download gff for
UFO03361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9630-RA | 35..1133 | 1..1083 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:07 Download gff for
UFO03361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9630-RA | 49..1147 | 1..1083 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:02 Download gff for
UFO03361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9630-RA | 49..1147 | 1..1083 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:02 Download gff for
UFO03361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8268750..8269848 | 1..1083 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:07 Download gff for
UFO03361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4094472..4095570 | 1..1083 | 97 | | Minus |
