UFO03362.5prime Sequence
822 bp (-61 high quality bases) assembled on 2009-02-03
> UFO03362.5prime
CAGTCGACATGGCCTCTGAGGAGACGGCGCTAACCGGCGTCGGCGAGCTA
CTATTCTCGCTGCTAATTGGATACCTAGGTGCCCTGGAATTCGCCTTTGT
GGCGCGCCATCTATACCACTGGACTTTCCAACATCCCGGCGATTCTTCTG
TAGATGCAGCAGCTGACGCAGAAGAATTGCCTCGCATGCGAGAGCGATTG
GATAAGCAGATCAAGGAGGCGGCGGAAAGGGAAGCCCTGGCAGGAACCAA
TGTCATGCAGGATGGTGTCCTATATGTCAATGGAATACGAGTAGATCCTG
CTGGAGATAAAAGACAAGCTTTGGCAGCCGAACTGGCACGTCAACAGCAA
ATTGAAGCCGATACGAGGCGTCAGCTGGCCGAAGCCGAGGCCTAGCTGGT
AGAAGAAAGACTACGACTCCAGAGGGAGAAAGAGGAATCGGAGGAGCAGC
AGAGAAAGCTCGTAGAGGCGGAAAGACATCGCGAAAGAGAGCATGCGGAG
AAAGAACTGCAGGAACTAAGAGAAGCCGAACGCAGACAGCTAGAAGCAGA
AGAAAATCAGCGTAAACAGCGCGAAAACGAGGAGAAAGAACGCCTAGAAA
ACGAAAGAAGGCTGATACATGCCGAACGGTAAAGGGAGGAGAATGAGCGA
AGACTGCAAGAAAGCTTGAAGAGCATCGCGAGCGAAAAGAAGCGAAAGAA
AATCGTCGTGGCAAAGCGTCATAGAGAGCTGGCCGAAGCCGAAAAGGATC
GAGCCGAACAACAAAGGATCCTGGGCTGATGCGAGGCAGCGCCAGCCGAG
CGTCCTCTCTTTGATGCCGAGA
UFO03362.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:33:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Lmpt-RL | 3051 | CG42679-RL | 639..1452 | 9..822 | 3680 | 97.2 | Plus |
| Lmpt-RK | 7424 | CG42679-RK | 639..1452 | 9..822 | 3680 | 97.2 | Plus |
| Lmpt-RJ | 4501 | CG42679-RJ | 639..1452 | 9..822 | 3680 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:33:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16900053..16900866 | 9..822 | 3555 | 96.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:33:52 has no hits.
UFO03362.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:16:27 Download gff for
UFO03362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11915-RA | 578..1399 | 1..821 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:36 Download gff for
UFO03362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lmpt-RJ | 630..1451 | 1..821 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:24 Download gff for
UFO03362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lmpt-RJ | 630..1451 | 1..821 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:24 Download gff for
UFO03362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16900044..16900865 | 1..821 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:36 Download gff for
UFO03362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16893144..16893965 | 1..821 | 96 | | Plus |
