UFO03363.5prime Sequence
1136 bp (1024 high quality bases) assembled on 2009-02-03
> UFO03363.5prime
CAGTCGACATGTACGTCCGGAATTGTCTGCCGTTCCTCTGCAGCTATTTG
CTGATCTCATTGGCGGCCACAGCTACTACGGATGAGGACGCGGATGCTGA
TGTGGATAGTGGCTCATCCCGAATAGTGCTGGTCTCCAGCTTGGAAGGTC
ATTGCCAGACGGAGGGCAAGGTGACCAGCTGCAGGGGCTTTGAGTTTGCG
GGAGAGGACGAGAAGGCCACCTTTGATCTGCCAACGGAGGTGCGGATTGC
CGAGGATGGCACCACCTACGAAGTGGGCGATGAGGAGCACTCGCGAACCC
TGATCTTCGAGAACTGCACCTTCACCAATTTTCCCCTGCGCTTATTTTAC
ACACTAGAGGTCAGTGAGCTGGACATGCGCGGCTGTGGCATCCGCTTCAT
TTACTGGGAGAACTTCTCCATTGGTGCGGATAAGCTGGTGATTCTTCTGC
TCAGCGATAATCACATCGAAGTGCTGCCCACGAAAACCTTCAGGGGAGCA
GGAAACTTGGAGTTTATCTTCCTGAATCGCAACAAACTAGGCAAACTGCA
GGCGGGTGCGTTTGATAATCTCCTGAAATTACAGTACCTGGATCTCACAG
AGAATCGCCTGGAGGCTTTAGCCGCGGACGTATTTGCCGGACTGAAGAGT
CTGCGGCACGTGGGACTGGCCGGTAATCAACTGACCACCATTGAGAGCGA
TTTATTTGCCCACAATCCGGACCTTTTGTCGGTCGCAATGCAGAACAATC
GACTGCGAGAGGTGGGCGAGTATGCCTTTCGATCCCGCGGACGACACCAT
CAGATGCAGTATGTGGATCTATCGAATAACCCCGAGCTGGTCGTTCTACT
GCTGAACATTAACGCCACCAATTTGACCGCTCGCAATTGCTCGCTGGACC
GTGTCAATTTGTACGGATCGGTGACGATGTCGATCTGAGCGACATCGCGT
GCGCGAGCTGTACTTTCCCGCCTCCGAGGCACTGGAGCATTTGTGCTGCG
CAACAACTCGCTGTCAGCTGGCGTCGTGAGCGGGTGACCAGAACTCGCAC
CTGGATGTGGGCGGACATCGACTGGGTCAGTTGCCGACGTGCGAACCCAC
TCTGAAATGTCTGTGTCCTGGAATCGGCCATGGACT
UFO03363.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:50:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10824-RA | 1855 | CG10824-RA | 39..1126 | 9..1085 | 5075 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:50:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21160031..21161054 | 1027..9 | 4905 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:50:04 has no hits.
UFO03363.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:16:23 Download gff for
UFO03363.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10824-RA | 32..1142 | 1..1096 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:35 Download gff for
UFO03363.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10824-RA | 31..1141 | 1..1096 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:15 Download gff for
UFO03363.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10824-RA | 31..1141 | 1..1096 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:15 Download gff for
UFO03363.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21159952..21161060 | 1..1096 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:35 Download gff for
UFO03363.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16985674..16986782 | 1..1096 | 97 | | Minus |
