UFO03372.5prime Sequence
1108 bp (999 high quality bases) assembled on 2009-02-03
> UFO03372.5prime
CAGTCGACATGCTTAAGCTGGGACTCGCGGTCCCCACTCGATGGTCCTTC
AGATGTCGTCGCCTTGGTGGAATGGCTATCATTAAAGGCGAGACAAAAAT
CTCCGTGGACAAGCAGAAAGCAGTCCAGCCGGAACAGGATGAGGACCAAC
AAGAGGTCGAGCCGGATTCCCAGCCGGCGGAAGAAAATCCAAGTATTCAC
AGGAACCAGAGAGTATTAGTTAATCATGCCATTCAGGAGATTCAGCACAG
GCCGTTGGAGGTGCCCACAATTATCGGCGATGATACAGTGTACACCATGG
ACACTCAGCGTGTTTGCTGCCCGCATCACCTGCAGACGAACTTGGCTCAC
GTCTACTACGCCAATCGCAAGCAAATCGAGGCGGCAATTAAGTCTGCTCT
TTCGGCGCAAGGAACTTGGAGTCTAGTTCCCATCGCCCAGCGACTGGCCA
TTTGGCGACGTGCCGCCACCATTATCGAGGAGGACGAGCTGCGGCTGAGA
GTGTTCCTCATGATGACGCTGAGCAAAACCGCCGACGATGCGACGCGGGA
CATTCGGCGGCTACTCACATCGCTGAGGGCCAATGCTGACTATTTGGAGC
ATCTGTCCGAGCTGCGCTTTGAGATCCAGGGTGATATGAATGTATTCCCC
AGCTTTCATTTGCGACCCATGGATGGATTTGTGGCCGCACTGGCACCATT
TGAATCGGTGGCCTTGTCATCCAGCTTGGCCCTCTGTCCGGCGCTCATGG
GCAACACGGTGTTGTGGAATCCCTCATTGGAAGTGGCACCAGTGAGCTAT
TTAATTTTCAGAGCCTTCCAGGAGGCGGGTTTGCCCAGCGGCGTTATCAA
CTTTGTGCCGGCCAACGAGCGTCTGTTCTTGGACACCATCACGGATGCCG
TGCACTTGCCGGACTGATACTCAAGCGAGTGCAGCTTTTTACAGGCATGT
GCACAAGCTGGTGAGCGATCGATGAGCGATACATCTGTTTCCTCGTCTGG
TGCGAGTGCCCGGGTCAGACTTTCATTTTGTCATGCAAGCGCTTAGTGGA
TCTGTCGTCTCAGCCCACCGGTGGCAGGGCGCCTTGGCCTTGACCGGAAA
GATATTGT
UFO03372.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:25:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6661-RA | 1976 | CG6661-RA | 150..1217 | 9..1065 | 5045 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:25:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14034925..14035992 | 9..1065 | 4820 | 98.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:25:50 has no hits.
UFO03372.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:16:31 Download gff for
UFO03372.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6661-RA | 144..1234 | 1..1085 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:59 Download gff for
UFO03372.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6661-RA | 144..1234 | 1..1085 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:01:20 Download gff for
UFO03372.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6661-RA | 144..1234 | 1..1085 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:01:20 Download gff for
UFO03372.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14034919..14036009 | 1..1085 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:59 Download gff for
UFO03372.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14028019..14029109 | 1..1085 | 97 | | Plus |
