UFO03405.5prime Sequence
1064 bp (784 high quality bases) assembled on 2009-02-03
> UFO03405.5prime
CAGTCGACATGTCCCAGTACACGCCCAACCAGCGGCTGGACACGCCCGGC
GCCCAGGAGTTCGGATTCCCGTACTCACCGTACGAAATCCAGGAGCAGCT
GATGCAGGAGCTCTTCCAAGTGCTCGAGAGAGGTCAGGTGGGCATATTCG
AGAGTCCAACGGGAACGGGGAAGTCCCTCACCCTCACCTGCGGCGCCCTC
ACCTGGCTGGCTAGGCACGAGGAGCTGGTGCGCACGGAAATGCTGGCCAG
GATTCGCGGAGTAGAACAGGAGTTGGCTAAACTCAAGGAGGAGAGCGAGC
AGTCCAGTAACTGGCTGGAGAGCCAGGGAAAGTCCAGAGCACAGCGGGCG
GAGCTCCTTAGATTGCAGCACCTGCAGGCTTTGCTGGACAAACAAGAGCA
GCAGCTGGATCAGATCAGGAAAGGGGCTAAAAAGCATAAGCGGCAAGGAA
GGGTGCACCCAGGCAAGCTTGAGGAACTGGAGAAGGACCTGGATCCTGAA
TCCGACTCGGATTCAGAACACGAAACCGCCGATGGACCGCAGGAAGCAGC
CGAAGACCGCTATCGCCCTGTGCAAATCTTCTTTTGCAGCCGCACCCATT
CGCAGTTGGCACAAATTGTGGCCGAACTGCGGAAAACACCTCATGGCCAG
TCGGTAAGGTCCATTTCCCTGGGCTCGCGGAGCAGCTGTGCGGGAACCCG
AGCCGAAGTGAGCTGCGGCTGTGACGAGCGTGCTGATTGGTACAAGAAGA
CGCCCATCCAGAAAAAGCGGTACTGAAGCACATAATGCCGTTAACGCTCC
TGTGATCCTAGGATTGTTTACGACGTGACTCAGAGTGCATGAGGACGCTG
GTGTGTCGATAGCTAGTCGTGGACCGTCACTAATATGCGACATGTGTCAA
GCCTCTACAGTGTTATCTAGGGCACGCATATAGCCACATGCGTGCCGTGC
GTCAACACGCCGTGACGCAGGCATCGTAGCCTCAACTCCCAATCTGAACA
TCTTATCCAGTAACACCAGTGTCGTGCAGCTACACCAGGTCTCATGATGT
GCCTCGAAAGCAAG
UFO03405.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11403-RA | 2890 | CG11403-RA | 103..791 | 9..696 | 3420 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:15:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1239094..1239782 | 696..9 | 3395 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:15:04 has no hits.
UFO03405.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:05:20 Download gff for
UFO03405.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11403-RA | 68..786 | 1..711 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:21:57 Download gff for
UFO03405.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11403-RA | 93..811 | 1..711 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:54:50 Download gff for
UFO03405.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11403-RA | 93..811 | 1..711 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:54:50 Download gff for
UFO03405.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1239074..1239789 | 1..711 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:21:57 Download gff for
UFO03405.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1133107..1133822 | 1..711 | 98 | | Minus |
