UFO03407.5prime Sequence
1195 bp (988 high quality bases) assembled on 2009-02-03
> UFO03407.5prime
CAGTCGACATGGCTGCCGTACGCCGCTCCACGCGCCTTAGTAGCATCAGC
AAAGCGACCGCCGCCTCTCCGCTGCCGCCGTCGACGCAGACGCCGCGTCG
CTCGGAAGTTTGGAAACGCAGGCAGCCGAAAAAAGTGCTTGCCGATAGCG
ACGAGGAGGAGGAGGTGGTGACGGCGATCTATGACCTGACCAGCCCCGTT
TCAGAGAACAACGAGAACCGCAACGTGCTCAACAAAATGGACAAGATCTC
CAGGCGCAGGACATCGCAAGTGCAGGTGGCTCAATCGGAGCTGCCAAAGA
CGCCACGCAGCACAAAGAAAACAGTCCAATCAGCTGGCAGTTCACGGGCC
AAACGTGAGGAGGAAAACCGTGAGGCCACCGCTAGATTCTTGGAGGGCGA
ACAGGATTCGGAGGTGGACCCGCTTCATGGATCGCCGCCGAAGCAGAGGA
AGTTGCAGCCACTGCCACAGCACCTGATCAGTCCTTCGCGGCTGCTGGAC
AGACTCAGCATCGACGAGCGCCAGGAGGAAGAGGTGGAGGCGACCACACA
CAAGACTGAAACGGCTGAGCAGCAGCCGAAACATCAAGCCAAGGACGAGG
CAAAGCCTCGGCCAAAACAGCAGGAGGATCCATTAGCGCAAAAGCAGCAG
GAGAAACCTCCAACAAAGCAGCCGAATAAAAACCAAACTAAAGAAAAAAG
CAATATCCAAACCAATGAGGAAACCCAACAGAATAACCTGCCATCTCCCT
CACGCAACAAATACCAAAACGCCAGACGAGTGCTCAACAGCGCCGAGACA
CAAAACTTGCCAGGACGTGAGTCCCAGCTCCAAGAGCTACGTGATTCTTC
AGCATCACTGAAAGCAGACTCCGGCAGCTCTATGTCTCCGGTCAGCAGGA
CAGCAGACGCTGCTATCGTACTGTGAAGATCCGACTCTCCAGCGCTGCAC
GTGTGACTTACTGCACAGATAGCAGTGTAGAGCAGTTAAAGAACTATGCA
CGACTGCAGTCAAGCAGCGGCGCACAAGAAAATCACTGGAGCATCACGTC
ACTAAGAAGCAAGCGATGCTTCGCTGTGCTGACAGATGATCAGTCTGCCA
CAGCGGAGGGTGAACGACTCGAGTGCAGCTCTCCGGTCAGAACTGTCTGC
ATGCATATTGATCCAGATCGGCTATGCCTGATGCAGGGCGACGAG
UFO03407.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:44:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cdc6-RA | 2483 | CG5971-RA | 121..1176 | 9..1026 | 4330 | 96.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:44:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8633103..8633949 | 854..9 | 4185 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:44:54 has no hits.
UFO03407.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:05:18 Download gff for
UFO03407.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cdc6-RA | 131..1036 | 6..906 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:38:23 Download gff for
UFO03407.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cdc6-RA | 119..1024 | 6..906 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:39:37 Download gff for
UFO03407.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cdc6-RA | 119..1024 | 6..906 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:39:37 Download gff for
UFO03407.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8633046..8633951 | 6..906 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:38:23 Download gff for
UFO03407.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8626146..8627051 | 6..906 | 98 | | Minus |
