UFO03412.5prime Sequence
1027 bp (941 high quality bases) assembled on 2009-02-03
> UFO03412.5prime
CAGTCGACATGCGATTGTATTGTCTCAGCGGGGACCTGGCCAAGCCATGT
TATATCATTACCTTCAAGGGCCTGCGGATTATGCTGGACTGCGGTCTCAC
GGAGCAGACAGTCCTGAATTTCCTTCCGCTGCCCTTCGTTCAGTCACTGA
AGTGGTCCAATCTGCCCAACTTCGTGCCCAGTCGGGATCATGATCCCCAA
ATGGATGGCGAGTTGAAGGACTGCTGTGGCCGGGTTTTCGTGGACTCGAC
GCCCGAGTTTAATCTACCCATGGACAAAATGCTGGATTTCAGCGAAGTGG
ATGTGATACTTATCTCGAATTATCTTAATATGCTGGCCTTGCCGTATATC
ACGGAAAACACGGGGTTCAAGGGCAAAGTCTATGCCACGGAGCCAACGCT
GCAGATCGGCCGATTTTTCCTGGAGGAGCTGGTGGACTATATCGAAGTGT
CGCCCAAGGCGTGCACCGCGCGCTTGTGGAAGGAGAAGCTTCATCTGCTG
CCCAGTCCCTTGAGCGAAGCCTTTCGCGCCAAGAAGTGGCGCACTATCTT
TAGTCTTAAGGATGTCCAAGGCAGTCTGTCCAAGGTGACCATCATGGGCT
ACGACGAGAAGCTGGACATCCTCGGAGCTTTTATCGCCACTCCTGTCAGC
TCGGGCTACTGCCTGGGCTCGAGCAACTGGGTACTGAGCACGGCGCATGA
AAAGATTTGCTATGTCAGTGGTTCCTCCACGTTGACCACACATCCGCGGC
CCATCAATCAGTCGGCGCTGAAGCACGCCGATGTACTCATTACGACCGGA
CTGACGCAGGCGCCGACGGTAAATCCGGACACGAAGCTGGGCGAGCTCTG
CATGAATGTGGCCTTGACGATCCGCAACAATGGGTCTGCCTTGATTCCCT
GCTATCCTTCGGGCGTTGTCTATGACCTTCTTTGAGGGCCTCACCCAGAA
TTTGGAAACGCTGGCCTTAAACAATGTTCCCATGTTTCTTTATTTCCCCT
GGTGGCAGACCAGCTCCTTGGCGGTAA
UFO03412.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| IntS9-RA | 2078 | CG5222-RA | 65..1075 | 9..1023 | 4885 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16104492..16105494 | 1023..17 | 4695 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:15:39 has no hits.
UFO03412.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:02:03 Download gff for
UFO03412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5222-RA | 49..1060 | 9..1025 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:21 Download gff for
UFO03412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IntS9-RA | 65..1077 | 9..1027 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:39 Download gff for
UFO03412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IntS9-RA | 65..1077 | 9..1027 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:39 Download gff for
UFO03412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16104489..16105498 | 10..1027 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:21 Download gff for
UFO03412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16097589..16098598 | 10..1027 | 98 | | Minus |
