UFO03416.5prime Sequence
1132 bp (928 high quality bases) assembled on 2009-02-03
> UFO03416.5prime
CAGTCGACATGTCCAATGTAGGGAAAATAAAGATAAGATCCATTGCGGAT
CTGCAGGCCACAGTACGAGTAAATGTAGAACCGGACCCAACGCCCACGAT
CGAGAACAGAACGCCGGACAAGAAAAGAGCGGGAAGAACTCGTGCGGCTT
CCACGACAAAAAAGGTCCGACCAAAGACGGAAGCATGTCCAATCATAGCC
AGCACTGCGTTCAAGCGTTCCAGCAAGAAGACTCCGCTGCCAGGACAAAT
GCGCATCGATAGCTTTTTTACAAGTGCCGTCAAGAACTACAAAGTCAAGT
CAAGTTCCTCTTGCAGGAAGGTGGATCCTCCGTTGGACAAGCGAAAGGTA
TCTACCAAAGGGCGCAAGCGCCTCTTCGAGGAGTCTACAACAACCTCATC
TGCCTTTACGGGCAAGCTGGATGCAAAGCCGTCAGAGAAGCGAGTGCAGC
CTAGTCGCCGTGCGAAAGGCAAGGAGAACGCTAGCCTCTCCGAAGTGCAC
GTAATTGACCTGTGCTCCGAGGACGAGCAGACCATAAAAAGAAAGCCATC
CGCGATAGCCTCTCCCTGTGAAAAAAGCAGCGATGTCCAAGCAACCAAGT
TTAGAACTCCAGAGACTTCCATGCCAGAAGCCAAGCTAAGCAATTCCAGC
CTAGACCTAGTGCAAATCTCCCCCGGTCCCAACAAATCCCCAACGAATAA
CTTTTACCGGTCATCGCCGGCTGCAATCACAAAGGAAAGCCCCCTGGGCA
AAAACTCTAAAAAGGAACTGTACGCAAACAAAGAAAACCAAAGCCTTGTC
CGCCCTATAAAAGTAGTGGAGGGTACATCCTTCTGCGTCGACGGCTTTCA
GTTGGGGAAATAGAGGGAGTCCCACATTACTTTCTCACGCAACCCTATTT
CTACTCACTACATCGGCCTGAATAGAAGTTCTGCCATCCCCTCTACGTGA
GTCCTATTTCCGCGCGCTTTGGTGCGAACGTTTATTAAACTCCGATGAAC
GGCCATTTCCCAAATTGATGTGGACCCAAACCTGGAAGTAAATGTGATCC
AAGTAACCGCCTAAAAAGCTAACCACGGTCCTGGAGCACTCTAGGTTCTT
CTTTAACATGAGACTCTGGGGAATGATATCGT
UFO03416.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:22:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Snm1-RA | 2589 | CG10018-RA | 52..1166 | 9..1125 | 4845 | 96.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:22:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5555135..5556201 | 9..1075 | 4555 | 96.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:22:29 has no hits.
UFO03416.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:05:12 Download gff for
UFO03416.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Snm1-RA | 42..1148 | 1..1112 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:36 Download gff for
UFO03416.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Snm1-RA | 48..1154 | 1..1112 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:59:19 Download gff for
UFO03416.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Snm1-RA | 48..1154 | 1..1112 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:59:19 Download gff for
UFO03416.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5555131..5556201 | 1..1075 | 96 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:36 Download gff for
UFO03416.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1380853..1381923 | 1..1075 | 96 | -> | Plus |
