UFO03419.5prime Sequence
1112 bp (961 high quality bases) assembled on 2009-02-03
> UFO03419.5prime
CAGTCGACATGGATCCCTCCGCGAGCCTGGCCGACAAGTTGGCCTCCAAG
ACTGCCAGCAGCAACTCTCTGGACAGCAGCTCCAAGTCCAGTTCGCTGGG
CTCCAAGCACGGTGGCGGAGAAAACGGCATTCTGCGGGACACGCCCTTCG
GCTATCTGGAGGGCGAAGAGGACCAGGACCAGAAGAACGACGTGACCTAC
GTGTGTCCGTACCGCGGCCCCGTCTTCGGCGCTCTTACCATAACCAACTA
CCGTCTGTACTTCCGGTCGCTTCCCCTGCGGGATCAGGAGCCGCCCGTCG
TCGTCGACGTGCCTCTGGGCGTGATCGCGCGTGTGGAGAAGATTGGAGGT
GCCACGTCTCGCGGTGAGAACTCGTACGGCATCGAGATTTTCTGCAAGGA
CATGCGAAACCTGCGATTCGCCCACAAGCAGCAGAATCATTCGCGGAGGA
CGGTGTTTGAGAAACTGCAGGCCAACGCCTTTCCGCTCTCGTACAGTGGG
CGCCTCTTTGCATTCGCCCACGCCGCGGCCAACTCTGTGAACGGTAACGG
AGGCTGGGACGGCTGGGCGGTATATGAACCGCTGGCGGAGCTGCGCCGCT
TGGGCGTTCCCAACGATATGTGGCGGGCGACCAAGCTAAACGAGTCCTAC
GCAATTTGCGACAGCTATCCGGCCGTGTGGGCTGTGCCCAAAGCGGCCTC
CGATGATTTCCTGAGGCGCGTGGCACAGTTCCGATCGCGCTGCCGCCTGC
CGGTTTTGTCCTGATGAACCCACGGACTCAAGCGACCATTACAAGGTGTT
CCCAGCCGCTGGTGGGTGTAAGTGGCAAGCGAAATTCCGACGATGAGCAT
ACCTAAGCTTTATCATGGAGGCGCCCTTCCTGCAAACAAGTTGACCATCA
TGGGATGCCCGAACAAGCGCCAATGCGATTGCTAACAAGGCCAAGGCGGG
CGGCTACATTCAGAGGACGCCGTACAATAACGTGGTAATCACCTTCCTCC
AACATAACACCATCCCTCGTGATGCCGGAGAAGCCTAACCAAAGTGAAGA
AAGCTGCTTCCCTCCTCCGATTACATCTAATGGCGAAGCTATTGAAACAC
CCTGGCTAATAG
UFO03419.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:22:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mtm-RB | 2230 | CG9115-RB | 205..1259 | 9..1062 | 4695 | 96.9 | Plus |
| mtm-RA | 2067 | CG9115-RA | 107..1161 | 9..1062 | 4695 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:22:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6035819..6036811 | 999..9 | 4465 | 98 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:22:13 has no hits.
UFO03419.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:02:01 Download gff for
UFO03419.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtm-RA | 101..1118 | 1..1015 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:24 Download gff for
UFO03419.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtm-RA | 118..1135 | 1..1015 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:59:08 Download gff for
UFO03419.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtm-RA | 98..1115 | 1..1015 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:59:08 Download gff for
UFO03419.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6035872..6036820 | 1..946 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:24 Download gff for
UFO03419.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6035872..6036820 | 1..946 | 98 | | Minus |
