UFO03420.5prime Sequence
1142 bp (958 high quality bases) assembled on 2009-02-03
> UFO03420.5prime
CAGTCGACATGGCGCACGTAAAGCGGTATCGGAGGTCGTCTAAGTCCTCG
GAGGAAGGCGACCTGGACAACGAGGACTACGTGCCATACGTACCGGTGAA
GGAGCGGAAGAAGCAGCACATGATAAAGCTGGGCAGGATCGTGCAACTGG
TTTCGGAAACGGCCCAGCCCAAGTCGTCAAGCGAGAATGAGAATGAAGAC
GACTCGCAGGGTGCGCACGATGTCGAGACCTGGGGACGCAAGTACAACAT
TAGTCTGCTGGACCAGCACACAGAACTGAAGAAAATTGCCGAGGCCAAAA
AGTTGAGTGCCGTCGAAAAGCAGCTGCGAGAGGAGGAAAAGATTATGGAG
AGCATTGCTCAGCAGAAGGCCCTTATGGGTGTGGCAGAGTTGGCGAAGGG
GATTCAGTACGAGCAGCCTATTAAAACAGCTTGGAAACCGCCGCGTTACA
TTCGGGAAATGTCGGAGGAAGAGCGCGAGGCCGTTCGCCACGAGTTGAGG
ATCCTAGTGGAGGGAGAAACCCCCAGCCCGCCAATTCGCAGCTTCCGGGA
AATGAAGTTCCCTAAAGGTATACTTAACGGCTTAGCGGCCAAAGGCATTA
AGAACCCGACCCCAATCCAAGTGCAAGGCCTGCCCACTGTACTAGCCGGC
CGCGACCTAATTGGAATAGCCTTCACTGGGTCTGGAAAAACGCTTGTCTT
CGTGCTGCCAGTCATCATGTTTGCCCTGGAACAGGAGTATAGTCTGCCTT
TTGAGCGTAACGAGGGCCCCTACGGCCTGATCATTTGCCCGTCCCGCGAA
CTGGCCAAGCAAACACACGAGATAATTCAACACTACAGCAAGCACCTCCA
GGCATGCGGAATGCCCGAGATTCTCTCCTGCCTGGCAATGGGTGGTTTGC
CGGTCAGCGAGGCCCTTGACGTCATCTCACGCGGCGTACATATTGTGGTG
GCGACCCCGGGTCGTCTATGGATATGCTGGACAAAAAGAATCTTTCTCTT
GTCTAGTGCCGGTACTTGTGCATGGAGAAGGCTGACCCATGATTGACATG
GTACTTGAAGAGGACGTTCGTATAAATTTCTCTTTCTCAAGGCTAGCGGA
CGACTTTTTCTTCTCTGGCCCATGCCAAAAGAATCCAAACTT
UFO03420.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:04:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| abs-RA | 1995 | CG14637-RA | 83..1224 | 9..1142 | 5060 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:04:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4233129..4234209 | 9..1087 | 4975 | 97.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:04:17 has no hits.
UFO03420.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:02:00 Download gff for
UFO03420.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| abs-RA | 87..1167 | 9..1087 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:16 Download gff for
UFO03420.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| abs-RA | 83..1163 | 9..1087 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:46:43 Download gff for
UFO03420.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| abs-RA | 83..1163 | 9..1087 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:46:43 Download gff for
UFO03420.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4233129..4234209 | 9..1087 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:16 Download gff for
UFO03420.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 58851..59931 | 9..1087 | 97 | | Plus |
