UFO03425.5prime Sequence
1111 bp (1003 high quality bases) assembled on 2009-02-03
> UFO03425.5prime
CAGTCGACATGCTGAAGAGAAACCCATTCCAGTACACACTGTGGAGCAAC
CTAATAATGATCACCCAAGGCGACATGGCTTGTTGCAACGTGTCCGCTGT
GCTCCGGATTTACGAGTACAGCATGCGCCGCATGCATGTGGGACACAACG
ATGAAATAACCCGAAGATTCATCATTAAGGAGACTGATGTGATAATGCTA
AAACTTTTTCACAATTGCTTACTATTCCTACGCCAATCGGGCCATACTAA
CTGGATGTTTGCTCTGATTCGTTTGTCTATGGAGTTGAATTTCCCCTACC
TGACGTTCGAATGCCTACAAGCACATGCAGGAAGAGAAAAAGCATTGATT
GGATTCGAGGAAGTGGTGCTGCGTTCGGGAATGCCGATGCCCGAGATCTG
GACGCGTGTGGAGCAGCTCAGACAGGCATACTGCTTCCTGCCGTTGAAAG
ACAAGCTGGCTTCGTCGACTAATGTCTTCAAAAACAAGATGAACGCCGAA
CGATACTTTTGCAGCGACAAACTTGTCCCATATGTACACGCACTCAAGTC
GCAGAATAATCGTCTGCACCTGGTGCTCGTGGTTGTTCAACTAATGAAAT
TGCCCCTGATTCGCAGCGCTAGTTTGGCGGACAAATTGAATCCTTGCATC
GAGGACTTCGGCGAGTCTGAGGCCATTGAAATGCTTTTCGCTGCCATAGT
AGATAGGCACTCCTATGCAGTGGCTTCGTTGCAATATCAATTTGATGCAG
CCATGATCGACTTAGCCAGAGAGATGTCCGTGACGCCCAGCTACATGCCG
CATCTTGTTGGCCATAAACTGTATGCGGATACCGTGAGTAATATGCTACT
CAAATGCGTCGAAGTCTTTATCGGCGAGGAGTCCAAGCGCCGATTGTGCT
TATTCTGTATTTGCGATTCCAAAAACTATTATAGTGCTGCACAAGTCCAT
GGGCAAGCTACGAAAAAATTCTTTAAGATAAACGAACACGATGCGCAACT
GATCATTGACGGAGACCGAATGTTATAGTTTCTACACGACAGCCTTGGTG
CGAATGAGGCTAGCATTACGACTGGCTTCATATTCAGATCATCAAAATCG
AGAATCAGCTG
UFO03425.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:10:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5877-RD | 3171 | CG5877-RD | 885..1968 | 9..1075 | 4965 | 98.2 | Plus |
| CG5877-RB | 2975 | CG5877-RB | 164..1247 | 9..1075 | 4965 | 98.2 | Plus |
| CG5877-RA | 3696 | CG5877-RA | 885..1968 | 9..1075 | 4965 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:10:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15294358..15295343 | 9..990 | 4715 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:10:33 has no hits.
UFO03425.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:01:55 Download gff for
UFO03425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5877-RB | 159..1222 | 2..1054 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:12:28 Download gff for
UFO03425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5877-RA | 880..1943 | 2..1054 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:02:06 Download gff for
UFO03425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5877-RA | 880..1943 | 2..1054 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:02:06 Download gff for
UFO03425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15294353..15295416 | 2..1054 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:12:28 Download gff for
UFO03425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15188386..15189449 | 2..1054 | 98 | | Plus |
