UFO03427.5prime Sequence
1104 bp (1007 high quality bases) assembled on 2009-02-03
> UFO03427.5prime
CAGTCGACATGATTTGCAAACAGGACGTTCTGCAGTGGTTTGAGAAACTC
GAGAGCTACAATCGGATCGAAACGATGTACGCCCTGCTCACCGCCTGCCT
GCCATTCGAGCTGCGATTTTTGGGCACGCTCCTCGAGGAGCAGGGCCGTT
GCGACTCGGAGACGCTGCGAGGCATGGAGCTGCGGGCGAATAACCCGCAC
GAGCTGGCCGCCGACATGGTGAACTGCCAGAAGGGCGATCCCACCGACCG
GAAGATCCGGCGCAAGATGGCCCTGTATCTGGCGCTTATCCGTGCCTGCA
ATCGGAACTGCGTCAGTGAGATCTACCGCACGCTGGAATGCTGGGGCGAG
TGCGATTTCAGTTGCATTAATGATCAGGACACGCTGTTGGAGCTGCTGCT
GGTCTACACGATGGCAGCCATCCACCCGGTGTTCTCCATGGAGGAGCAAA
AGAAGATTTTCGGCATTCTGGCTAAGATCAAGGAGAACAAGTTGGTAGCA
GAGCGATTCGCGCCTCAAATGCAAAGACAGACACAGACGCCAGTGCTCCA
GCATCCTCACCCGCCGTCCCCACATGACCTGGTCATTCAGCAGCAGCCAC
CACACGTGATCCACCAAATACCAGGACCGCAGCAGGCGCCCCCGCACCCG
CAACATCCTCAAATGGTGCAGGTACTGCAGACGCCGCAGGGCAACATACC
CATGATCTTTCCCCAGCACTTTCAAAAGCTTCTGCCCAGCTCTGATGGAA
CGCACCAGATCAGTGTCGATGGCATGCCGCACCTGATGCAGCCTAACATC
ACCATTCCAGCGGACACTAGTGCCATCATCAGTCACCAGAACACGGGATG
GACGATGCGTCACTACGTGCCACAACCGCCCCACCAACAGCCCGCTCTGC
AGCACTTCTTTTGCAAAGTCTGGACCATCAGTGCCACTGCCAGCTCGCCG
ATGCTGAGTCAGCAATCCTCGCCATCGAGTAGTCGCACCCCGAGTCCTCA
GGCGGGACCGCTCCTTTTACGTTCCACTGCAGGCGCAGCAGCACCACATC
AGCAGCAGCGATGGAGGGCCTGTCCACGATGGCGATCAAAGACCGCGCGT
CCTC
UFO03427.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:45:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10492-RB | 4096 | CG10492-RB | 774..1847 | 9..1075 | 4985 | 98.1 | Plus |
| CG10492-RA | 4507 | CG10492-RA | 774..1847 | 9..1075 | 4985 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:45:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19054851..19055570 | 9..728 | 3600 | 100 | Plus |
| 2L | 23513712 | 2L | 19055627..19055965 | 727..1059 | 1220 | 94.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:45:54 has no hits.
UFO03427.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:01:54 Download gff for
UFO03427.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10492-RB | 764..1844 | 1..1075 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:38:44 Download gff for
UFO03427.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10492-RA | 767..1847 | 1..1075 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:28:20 Download gff for
UFO03427.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10492-RA | 767..1847 | 1..1075 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:28:20 Download gff for
UFO03427.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19054844..19055570 | 1..728 | 99 | -> | Plus |
| 2L | 19055629..19055976 | 729..1069 | 94 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:38:44 Download gff for
UFO03427.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19054844..19055570 | 1..728 | 99 | -> | Plus |
| arm_2L | 19055629..19055976 | 729..1069 | 94 | <- | Plus |
