UFO03430.5prime Sequence
976 bp (99 high quality bases) assembled on 2009-02-03
> UFO03430.5prime
CAATCCACATGGAGGACCAAAGCAACGCAGCCCCCGCTGTCGCCGCGGAA
AACGGCGGAAACACCGCGCAGGAGGTGTCTTCGACAACTCATCCCATAGA
GCCCACAAAGCGCTCGCTGCGCGTGCAGACCTGGAAAAAGATCCAAGAGG
GCAAGGTTGGCATTGGATTCAACAACATATTTAACCGAATTCCTTCTTTC
GTGGGTGCCGATAAGGCTGCTGCCTTGTTTGCCAATGAACAAGAGTTCAA
GAAAGCACAGCACATCAAGGTGAACATCGATCGCGTCTTGCATGAGTTTA
AGGAACTGGCATTGCTGGCCGACAAGTCCGTATACTTGCCCAGCACCCGC
GAATCTTCTGCACTGTGCCTAAAGGTAGATGTGCTGGCCGATGCCACCGA
GGAGCATAAAAAGGAGGCTCTGCGCGTTCAAGATATTCAAAAGTTTCGCT
CGGAAATTGGATTGGACAGCGGTCTGAAGCTGGACATCGTGGTTATTGGC
TCTGTTGTACTGTCACGCGAGGGTTACCGCATTGGACGCGGAAATGGTTT
CGCTGATCTGGACATCGGCCTCCTTATTGAACTGGGAGCCATTACACCGA
AGACAATTATTGTCACAATCGTGCACGACATGCAGGTGGTGGACTCACTG
CCCCCGAATCTATTCCAGATGTACTATACGCCAGTTGATATCATTGCAAC
ACCCACAGAAATAATCAGGGTGCCAAAGCGCTTGTCTTTCCCCATGGCGT
TTACTGAGAGCTGCTGTCCGAGCGCCGTCTAAAATATTGCCCGTGCTGCA
CAGCTTACGAAAGGGAGGAGAAAGCGGGAAAATCCATATCCCTCAAGGAG
AATACTCCATGTGTAGCACATCCCAACATCTGCCCCCGCCGTGGGCCTGT
GCGCCGGTTCTCCAACGAGGAAACCCATGTCGCACCACCTCCCAGACTGA
TACCAACAGCCGCAAGGTGAGACTGC
UFO03430.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:08:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lost-RA | 2691 | CG14648-RA | 127..1103 | 9..976 | 4210 | 96 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:08:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4404697..4405400 | 255..950 | 2790 | 95.7 | Plus |
| 3R | 32079331 | 3R | 4404465..4404639 | 84..258 | 800 | 97.1 | Plus |
| 3R | 32079331 | 3R | 4403202..4403280 | 9..87 | 380 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:08:36 has no hits.
UFO03430.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:01:52 Download gff for
UFO03430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| growl-RA | 147..1118 | 1..964 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:56:14 Download gff for
UFO03430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lost-RA | 147..1118 | 1..964 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:42:53 Download gff for
UFO03430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lost-RA | 120..1091 | 1..964 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:42:53 Download gff for
UFO03430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4403195..4403280 | 1..87 | 94 | -> | Plus |
| 3R | 4404469..4404639 | 88..258 | 97 | -> | Plus |
| 3R | 4404701..4405415 | 259..964 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:56:14 Download gff for
UFO03430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 228917..229002 | 1..87 | 94 | -> | Plus |
| arm_3R | 230191..230361 | 88..258 | 97 | -> | Plus |
| arm_3R | 230423..231137 | 259..964 | 95 | | Plus |
