UFO03434.5prime Sequence
1140 bp (999 high quality bases) assembled on 2009-02-03
> UFO03434.5prime
CAGTCGACATGAGTGACGACGAGGAGCACTACGAACCAAAGGCACACAAG
AAGCTGCTGCAGGCCATCGGCAGTCTGGGCAAGGTGCAGCACATCCAGAA
GTCCACGCGCGACGAGCGGCAGTCGCTCCAGGATGAGTTCCAGCTGGTAA
AAGGTGTTTCGTCAGCGGAAACGGATCATGCCCCCAGAGCCGTGGGTCTG
AACGATCTGGTAGACATCCTACGCACCTCCACCAAGCACAGTCAGACGGG
CAAGAAGCTCAAGAACATCCATGGCAGCAAAAAGGTGCTACAGAAGCCGC
TGGAGAAACCAGCTGCGGATCGAATTAAACGGACCATTGGCTACGAGGGA
GTTACCAAGAAACTCGGTCGTTGGGATGCTGTGGTGGCTCAACAGAGATC
TGCGGAGACGCAGATCTTCCCCCTACCATCTGAAACGGTTTACGTAAATA
CTGCGGCAAATGCCAGGCCTCTAAACACCCGGGTCAAGTCCAATCTTGCT
CAAGAACTCGAGGCTAACAACCGTAAACTACGGGAACTGCGCAAAGCGCA
AATTGGGGATACCACGGATGAAAAGGAGCTGGCCAAGCAAGAGCGGCTTT
TACTACAAAAGAAGCTTACCAGGGACGAACTATTTGCCCGTCGCAAGGAG
CTAGCTTACCTGAAGATGCGCGAGTCTCAAAAGTCAGCAAAGGCGCGCAT
GCAAAACAAAATCAAATCGAAAAAGTTCCACAAGCTGCAGAAGAGACAAA
AAATGTTGGAGCAGATGAAGGAGTTCGAGTTGCTGCAGAAAACCGATCCA
GAGGCGGCGCTGGAAAAGCTTAATGCCCTGGAAAAGAGTCGAGTGCAGGA
GCGTTCCAGCTGCGGCACAGACACCGGTACTTGGCGAGATCTGCAGATAC
GGGCCAGTACGACAGGATGTGCGAAAGATCTGGCCGAGCAGTGGCTGTAG
CAGGACTGACCCAGAAAAGCAGTGTCAGACAGCGAAGATGAACACCAGAA
GAGAGTTTACCCGAGGAGGAGATATGACTACGATCCTTTATCTGGACAAA
AGAAAGCTACGAGCACGGAAATGGAATGGTGAAGTGAGCGTTCATGGCGC
ATTGCAAGGATAACGAAGTACTGGAGGACTCCTAGGATTG
UFO03434.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12301-RA | 2515 | CG12301-RA | 91..1208 | 9..1093 | 4775 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15581351..15581947 | 411..992 | 2295 | 97 | Plus |
| 3L | 28110227 | 3L | 15580890..15581294 | 9..413 | 2025 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:15:27 has no hits.
UFO03434.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:01:58 Download gff for
UFO03434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12301-RA | 49..1121 | 9..1055 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:16 Download gff for
UFO03434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12301-RA | 91..1163 | 9..1055 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:33 Download gff for
UFO03434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12301-RA | 91..1163 | 9..1055 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:33 Download gff for
UFO03434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15580890..15581294 | 9..413 | 100 | -> | Plus |
| 3L | 15581354..15582021 | 414..1055 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:16 Download gff for
UFO03434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15573990..15574394 | 9..413 | 100 | -> | Plus |
| arm_3L | 15574454..15575121 | 414..1055 | 95 | | Plus |
