UFO03445.5prime Sequence
1104 bp (993 high quality bases) assembled on 2009-02-03
> UFO03445.5prime
CAGTCGACATGCGAGCCCAGGATCTGCTGCTGCTTGCCACCGCTTTAATC
GGCGCTTACCTACCGCTCACCGCCGCCTGTTCCTCGCGTGCCATCGCTAA
GCCGCGGCCAACAGCTGCACCGATCCTGCCGCCGGATAATGTGGAAATAT
CCACAACGCCGAGACCGAATGTCACCTTCCCGATCTTCGCCTGTCCACCG
ACCTATGTCGCCTGGTATTGCCTGAACGATGGCACCTGCTTTACGGTGAA
GATCCACAATGAAATCCTATACAACTGCGAATGTGCGCTGGGATTTATGG
GTCCGAGGTGCGAGTACAAGGAGATTGATGGCTCGTACCTGCCAACCAGG
AACCGTGTGATGCTAGAGAAGGCCAGCATTGTTAGCGGAGCAACGCTGGC
CCTTCTGTTTATGGCCATGTGCTGTGTGGTTTTGTATCTGCGACACGAGA
AGCTGCAAAAACAAAAGCTGCACGACAGCACCACAACCACAACGACCGAC
GGTGGCTGTCAGAACGAGGGCATGGACGAGGTGGATGGCTTGCGACCCTT
ACGTCCAGTGAGACGTCCCTTTGGACCCTGCCGCATCCTATCGCTGGAGG
AGGCCCACCTTCAAGCGAAAGCCTCCAATCGCCCCAGGCATTGCAACGAA
CTTTTGCGCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGT
AAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTA
GGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCC
CGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCAT
TACTGGATCTATCAACTGGACTCCAAGCGAGCTCGATATCAATTACGCCC
CGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCG
ACAGGAAGCCATCACAAACGCATGATGAACTGATCGCCAGCGGCATCAGC
ACTTGTCGCTTGCGTATATATTTGCCCATGGTGGAAACGGGCGAGAGTGT
CCTTATGCCACGTTTATTCAAACTTGGGAACTCACCATGCATGCTGAAAC
GAAA
UFO03445.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:28:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Krn-RA | 1354 | CG32179-RA | 384..1034 | 9..659 | 3255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:28:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17649882..17650532 | 659..9 | 3255 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:28:39 has no hits.
UFO03445.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:01:36 Download gff for
UFO03445.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Krn-RA | 371..1035 | 1..666 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:29 Download gff for
UFO03445.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Krn-RA | 375..1039 | 1..666 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:43 Download gff for
UFO03445.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Krn-RA | 375..1039 | 1..666 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:43 Download gff for
UFO03445.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17649877..17650538 | 1..666 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:29 Download gff for
UFO03445.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17642977..17643638 | 1..666 | 98 | | Minus |
