UFO03450.5prime Sequence
1118 bp (999 high quality bases) assembled on 2009-02-03
> UFO03450.5prime
CAGTCGACATGAGTGTTCTGGAACAGCTGGGTGCTCTAGATATCGGTACA
AATGAGCAGGTGGACGAAACGCTGCAGCGGATTGCCGACGAAGAGGCAAA
AGTTAACGAGAAACTGGAGTCGCTGCTGGCCAAACAATGCCAGATTGAGG
CCAAAATGAGTGGCATTGGGCGATCACTCAGCCTGCTTCACACGGTGGAC
AGCGATTCCAACAAGCTGAACGACCAGATCGTAAACACTGCCCAGTTGGC
CGAATCGGTGAGCGCCAAGGTGCGCCGTTTGGATTTGGCCAGGTGCCGTG
CCTCCGAGTGCCAGCAGCGGGTGCACGATCTGATCGACCTGCATCTGTGT
AGCCAGGGCGTGGTGAAGGCCATCGGCGAGGAGGACTACGAGAAGAGTGC
CACCCACATTGCCCGCTTCCTGGCGATGGATCAGCAATTGCTGCGGCGCA
CCGCCGACGACGTTCAGGGCTCCATAACGTCGGTTAGCGATGCGGTCAAG
ACGCTGGAGGATGCCACCGAGAAGACCCGCGTGCTGATTGCCAAGCGCTT
CGATGAGGCAGTCAAAGCCGATGATTTGGCCTCTGTGGAAAGATTCTTCA
AAATCTTTCCACTAGTCGGTTGCCATCGCACCGGAATCGAAAAGTTCTCG
CTCTACATTTGCCAAAAGCTGGCAAACAAGGCGCAGAAGGAACTAAGGAA
CGCCCAGGACATAGCCAAGGCGGAATCGCGCCTGCAATTGGCCTACGCAG
ATCGGCTGACTGCTATTTTGGAAAACTTCGCCAGGGTGGTGGAAGTCAAT
CAGCCGATAATCGAAGCCTTTTACGGACAAGCTTCATCATCACTCATCGA
CATGGTGTCCATACTGCAGCACGAATGCGATACGAGGTGAAGACTCTTCT
ACTGGAGTTCAACAAGAACCGGCAGATCCAGTACCGCAGCAGCAAGTAAA
TGATCTCCTCAGCGGTCGCCGGTGGCGAAATCTTCGGGAGCACAGCATCC
AGCACTGGTCATTATAGAAACATCTGGCGGCTCGGTGGACAGCTAATTCC
AAGATCGATGCCATTATAGGCTGAATACGTCATGCGCTAGTCGAATTGTA
CTTCGATTATGCTCGGCC
UFO03450.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:22:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7456-RA | 2666 | CG7456-RA | 126..1257 | 9..1117 | 4940 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:22:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10487617..10488355 | 832..94 | 3695 | 100 | Minus |
| 2L | 23513712 | 2L | 10487342..10487559 | 1041..833 | 540 | 91.7 | Minus |
| 2L | 23513712 | 2L | 10488410..10488497 | 96..9 | 440 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:22:04 has no hits.
UFO03450.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:01:33 Download gff for
UFO03450.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7456-RA | 120..1219 | 1..1085 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:16 Download gff for
UFO03450.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7456-RA | 119..1218 | 1..1085 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:59:02 Download gff for
UFO03450.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7456-RA | 119..1218 | 1..1085 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:59:02 Download gff for
UFO03450.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10487617..10488353 | 96..832 | 100 | <- | Minus |
| 2L | 10488411..10488504 | 1..95 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:16 Download gff for
UFO03450.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10487617..10488353 | 96..832 | 100 | <- | Minus |
| arm_2L | 10488411..10488504 | 1..95 | 96 | | Minus |
