UFO03465.5prime Sequence
1117 bp (982 high quality bases) assembled on 2009-02-03
> UFO03465.5prime
CAGTCGACATGTCTGTGAATGCGGATCTGCAGAGAGAGCGGGCGGCGGCC
ACCTTGGACAGCGAGGACTTTGCCCGCTGGTGGGCGGGTGGCTCTGGGCA
GCTGGAGGAGCGCCGCGCCCTGGAAAGGCGTTTCTATGAGGATCCCGACT
TCGCGGAGCCAGTGCATCCGAGCTGTCTGTCATACAAGGAGCGCTACGAA
CAGACCGTGGCCCGATCCACACGCTTCCTGGCCAAACTGCGCCAATGGCA
GCGGGAGAAGCAGCCACAACTTCAGCTTAGTGTGAATATGCTGAGGGACT
TTCGGCTGCTACTCTCCGGATCCCTGGGCACGGGCCTCTTCCAGCAGAGC
TTCCCCCTTCGGGTGCATTTCTCCATGTTCATGACCACCTTGCTGAGCCA
GGGAACCGAGGAGCAGCAGGCCCAGTGGCTCAATCGATCCTGGCACATGG
ACGGCGTCCTGGGCACCTATGCGCAAACGGAGCTGGGTCACGGCACCTTT
GTCCGGGGCCTGGAAACCCGAGCCGACTACGATCCCATCACGCAGGAATT
CATCCTGAACACCCCAACGCAAAGTTCATACAAGTGGTGGCCCGGCGGAC
TTGGTAATACCGCCAATGTGGCCATTGTGCTGGCCCAGCTATATGTGAAG
GGCAAGCATTATGGCTTGCAATCATTTGTGGTGAGGATCAGGGACGAGAG
GACACACGAACCGTTGACTGGAGTCGATGTGGGCGATATAGGACCTCGCC
TGGGTGGCAATGGCGTTAACAACGGCTTTCTGGGACTCCGCGACGTGCGG
ATACCGCGCAATCAAATGCTGATGAAGAACGCCCAAGTCCTGACCGACGG
CACCTTCGTCCAGGGTAGACCTCCGCTGCTGCTCTACGGCACATGGCCTA
TTTTGCGGGTAATTACCGTGAAGGATGTGCTCTTTGGACTGCTCCAGGCT
GCCACCATTGCCACCAGGTATTCCGTGTGCGTCGCAGAGCCGGATTACAG
CGATCAGCTGAGGTCTCTTGTTTTGGATCCAATCAACAGCAGTAAGATTC
TACCGCAAATGCTCGAGGAGTGTCTATCGCCCTGAATCGATGCCTGGGCG
CTTCTACAAGACGTACT
UFO03465.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:45:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4586-RA | 2240 | CG4586-RA | 100..1221 | 8..1117 | 5065 | 97.6 | Plus |
| CG5009-RA | 2506 | CG5009-RA | 765..902 | 462..599 | 255 | 79 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:45:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6970017..6970978 | 8..969 | 4690 | 99.2 | Plus |
| 2R | 25286936 | 2R | 17762497..17762634 | 462..599 | 255 | 79 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:45:45 has no hits.
UFO03465.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:01:26 Download gff for
UFO03465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4586-RA | 70..1169 | 1..1091 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:38:39 Download gff for
UFO03465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4586-RA | 94..1193 | 1..1091 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:28:16 Download gff for
UFO03465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4586-RA | 93..1192 | 1..1091 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:28:16 Download gff for
UFO03465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6970010..6970976 | 1..967 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:38:39 Download gff for
UFO03465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6864043..6865009 | 1..967 | 99 | -> | Plus |
