UFO03467.5prime Sequence
904 bp (44 high quality bases) assembled on 2009-02-03
> UFO03467.5prime
CAATCCACATGAAAAAGGCGACTACTTCCGCGGCCGCCCAGTCTCAAGGC
AACATCAAAATGCAGAAAAACGCAAATAACGGCACAGCTAATTACAAGAA
CAATCCCAATCTAAATAAAGAATCGAATGATTCCAATTCGGTATCTGATA
TGCTCGCCGTAACCTTGGACCAAGAGGTGCATGCCTTTTTCTTTTTTTTA
TTCGACGATGACGCCGGTCCATCAACATCCAAAAAGACCCAGACAGGGTC
AGCCTCAACCGCTAAGACCGCACATATCAAGCGACTTCTTCAGGCCGAGG
AGGATGCCAACAATAATGATACCGGAAAAGCCGGTAAGTTGACCAAGGAA
TCGGAAGCTACTCAAGGAGCCAGGGCCACCAAACGCAAGCAAGCACGTAG
TCTGGGACTGGAGCGCACCTCGCCGATCCAGGTTAATGGCGCGGCTTTAG
CCTGCCCTTTGGTGCGCGAATCGCTGCCCCCAGGGGAGGCCAATTCCTGT
CCTCAGCCGCCCAAAAAGGACCCACCATCCGTGAACTCATTAGTTAAAAT
AATTAAGGCGGAACCCACCGAAGAGGGCAATAATAACAATGACGAAAAGG
AGACTGAAACAATATAAACTCACGAAGCCGACAGCGTCTAATAGGGTCGT
CGCGTCCTGCAGTGGATACTCTTTCCGGTCCAAACTAAAGTCTTCTTCAA
AGACTTCTGGGAGCACACCGCCTGCCTGGTGCAGCGCTCTAATCCCAAAT
ACTTTCAAAGTATGATATCATTCAAGATGCTTGACGAAATACTGATTCGC
CATCATTTGGACTTCACCGTCACGTGGATGTGACCACTTACAAGAACGGC
GAGCGTGAGACACTGAATCCGAGGTCGTGCCTTGCCCATCTGTGTGGAGC
TCTA
UFO03467.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:39:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2982-RC | 2242 | CG2982-RC | 125..1022 | 9..901 | 3910 | 96 | Plus |
| CG2982-RB | 2246 | CG2982-RB | 129..1026 | 9..901 | 3910 | 96 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:39:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4319628..4320490 | 9..870 | 3830 | 96.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:39:11 has no hits.
UFO03467.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:01:24 Download gff for
UFO03467.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2982-RA | 70..972 | 1..903 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:50:27 Download gff for
UFO03467.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2982-RB | 125..1027 | 1..903 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:08:41 Download gff for
UFO03467.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2982-RB | 125..1027 | 1..903 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:08:41 Download gff for
UFO03467.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4319624..4320526 | 1..903 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:50:27 Download gff for
UFO03467.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4213657..4214559 | 1..903 | 95 | | Plus |
