UFO03470.5prime Sequence
1112 bp (967 high quality bases) assembled on 2009-02-03
> UFO03470.5prime
CAGTCGACATGCCGCGACGCTATCAAACAGCTCTCAATTCGGCCAAATAC
AGTGCCCAGGTCAAGACCAAAACTAGTGACAACGAATCCGATTCCGAAGA
TGATCTTCCGCCGGATCAAGATGCTGAGGATAACAATGAGCCAGATAATC
TGCGCAGCATTTTGGAAAATGCGCCGCACTTCTCTTATCCCGGCTTGAAC
ACTGGAATGTTGGGCCAACTCTTGTACGATCATCAGGATAATCCGAAGCA
GGACTTGCCAAATTGCTCGGTTACGGTGCCGCTACCCCTCTTCCTGGCAA
AGGATGGACAAACTCCCCGAGTGGAGGCATGCGTCCAAAGGCCATTCCGC
TACGACGATTGGACACGGCAATTGCAATTAGGCAAGGCTATATTTGATAG
GCGACTTAAAAATATGAGACAGCGTGTACAGAAGCAGGAGCAAGGTGTAC
ACGATGCCAGTCTGTTTGAGATGGCTGAGCACATAGCCCAACAGGAGAAT
TCCTTCTTCAGGGACAGCTACGATTACTACTACACAGGCGGAAACCTAAA
CACGATTCCGTTTGATGGAAACGATCAGCTGGCCATGCATGTCAGCGGTA
ATAAGCTCAGAGATTTGCACTTTTCCCGAGATTATGGTGAGGCGGAGTTT
TGGCAACCATTGCATTCGGCTACGATAGAGGAATCCTCCAGCGAAGTCTT
TGAACTTCTTCCGCTCCACAATTTAAATCGCAGTCAAATGTTCCTGGCAC
GGTTGCTGAAGGAGGTTTCCCTATACGAACTTAAATGCAAAGACGAACAG
GATTCGGATTCAGATTACGAACTCATTCGCCATTGCATGTTTAGCATCCG
TAGCTCTCTTTTACAAGCGCTGCACAATCATTGGCCAATGCCAATACATT
GGCCTTAGCTAGCCAGGATAGGTCTTTGCGCTTCGTGGATATTTCGACAC
ACAGGATATAGCCAAGCTGATGTTGCTTGCTAAAAGGACTGAAGAAAAAC
TCGAGTACCTGGCACAGTTAAGCAAGCGAGGAAAGCACTTTCCTGCTACC
AGCAGTTGTTACGTACAATGGGGATGCATCTGCCCTGAATCCCTGCTTGC
AGCGGGCGTTCA
UFO03470.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:08:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TAF1C-like-RA | 2753 | CG10496-RA | 109..1147 | 7..1038 | 4945 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:08:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21500538..21501548 | 1012..6 | 4750 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:08:25 has no hits.
UFO03470.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:01:30 Download gff for
UFO03470.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10496-RA | 341..1356 | 1..1012 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:56:06 Download gff for
UFO03470.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10496-RA | 103..1118 | 1..1012 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:42:47 Download gff for
UFO03470.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TAF1C-like-RA | 103..1118 | 1..1012 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:42:47 Download gff for
UFO03470.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21500509..21501550 | 1..1038 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:56:06 Download gff for
UFO03470.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17388014..17389055 | 1..1038 | 98 | | Minus |
