Clone UFO03476 Report

Search the DGRC for UFO03476

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:34
Well:76
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcriptl(2)34Fd-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO03476.5prime Sequence

491 bp (35 high quality bases) assembled on 2009-02-03

> UFO03476.5prime
CAATCCACATGTTCGTAAACAAATTTAACGATGTGAGTATCTACAACCTG
AACGCCGGTGAGTGGGTGCCAAATTGGCTGACGGATCGGCGAAAGCGGTC
ACTTCTCATGAAAAAGCTGGACTCCCGGAAACTCATCCACCTCCTCCAAA
ATTTCGATATGCCCGGCGTCTGCACCATTATCCTGATGATTCCCGACCAA
CAGTACATCCTGGCCACCGGCACTTACAAGCCGCGCGTCAAGTGCTTCGA
GGTGTCCAACCTGTCTATCAAATTATAGCGCTGCTTCTACGCCGAGGTGA
CCACCTTTGAGGTGATTAACTACTACTACGGGAAGATGGTGTTCCTGCTA
TGCAATCACTTTGTGGAGATCCATGCGGCCCACGGGCGGCACTACGGACT
AAGGATACCGCGCTTTGGACGCGACGTGAGTGACCTCAAGACCCCCTGCT
ACGTGTTCGTCGAGGGAGTGGGCAGGGACATTTTCCGACTC

UFO03476.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:45:43
Subject Length Description Subject Range Query Range Score Percent Strand
l(2)34Fd-RA 2321 CG7516-RA 89..571 9..491 1635 89.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:45:42
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 14354471..14354873 477..75 1370 89.3 Minus
2L 23513712 2L 14354935..14354997 71..9 195 87.3 Minus
Blast to na_te.dros performed on 2014-11-28 20:45:43 has no hits.

UFO03476.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed on 2010-02-03 12:01:19 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 23:38:37 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 21:28:14 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 21:28:14 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 23:38:37 has no hits.