UFO03479.5prime Sequence
1096 bp (1021 high quality bases) assembled on 2009-02-03
> UFO03479.5prime
CAGTCGACATGAGGATTGTGTGGAGTAAGAAGCTCTTGCTATGGCTACTG
CTGGCTGCCCTCATGGTGACGGCGTTGACTCTGGGCTTGGTCTTCGGTCT
GAAGAATCGGGACACGCTGTACATCAGCGGAGCCGTGGTGTCCAATGGCA
TCGGATGTGCTGCGGTCGGCGGTGAAATGCTGACCGATGGCGGTTCCGCC
GTGGATGCAGCCATTGCTACGCTGCTGTGCGAGGGCCTGCTATTGCCGCA
CTCAATGGGCATTGGCGGTGGCTTCGTGGCCACCATATATACGCGAAGTA
GCCGCAAGGTGGAGACGGTGATTGCCAGGGAATCGGCACCGGCGGCCGCG
CACAAGGACATGTTCGTGGGCGAGACGTCGATTACGGGCGCCAAATCGGG
TGCGGTGCCCGGCGAGATTCTTGGCTACTGGGAGATGCATCGTCGCTATG
GCATCCTGCCCTGGAAACGCCTCTTCGAGCCGTCCATTAAGCTGGCCCGC
GAGGGTCATGTTGTTTCGCGCTATCTGGCCGCCGCCATCCAATCCAAGCT
GGATAACATTAAGGCAGATCCCGGGCTCTCGGCCGTGTTCCTCAACGCAA
CCGGTGATCCCCACTTGGAGGGCGATTACATGAAGCGTCCCGCGCTGGCC
GACACGCTGGAGCGGATTGCCGAGAATGGAGCCAAGGAGTTCTACGATGG
CGGCGAGACGGGTCGCAAGTTCGTCGAGGATATCCAGAAGATGGGCGGCA
TCATTACGGAGCAGACCTGCGCGATTACACGGTGCGCTGGGAGAGCGATG
GACACGTGTCGGCCCATGTGAGTGGCACGTACACGCTCTATTCCACGCCC
ATGCCCAGCAGCGGACCCGTTCTGGCCTTATCCTCAATTCGATGGCCGAT
CTCTATACGGACATGAGCCGATCTATTGGCAGCGCCGTGTGGAGGCCTTT
AAACACGCCTATGGCCAGCGCACCAATCTGGGTGATATGTATGCCGATCC
CGTGAGCGCCGCGTCATCATGCCACCTGAGGACATGCTCAAGCTGATCTG
AAGGTAGAGCTGATCAGACATAGACTCGAGACTACCTTCCTATGGC
UFO03479.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:21:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ggt-1-RB | 2212 | CG6461-RB | 290..1331 | 9..1043 | 4930 | 98.8 | Plus |
| Ggt-1-RA | 2396 | CG6461-RA | 474..1515 | 9..1043 | 4930 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:21:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18507677..18508683 | 1015..12 | 4795 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:21:56 has no hits.
UFO03479.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:01:18 Download gff for
UFO03479.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6461-RA | 304..1353 | 1..1043 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:09 Download gff for
UFO03479.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ggt-1-RA | 304..1353 | 1..1043 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:58:54 Download gff for
UFO03479.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ggt-1-RA | 466..1515 | 1..1043 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:58:54 Download gff for
UFO03479.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18507645..18508693 | 1..1043 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:09 Download gff for
UFO03479.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18401678..18402726 | 1..1043 | 98 | | Minus |
