UFO03482.5prime Sequence
1130 bp (1027 high quality bases) assembled on 2009-02-03
> UFO03482.5prime
CAGTCGACATGGATTTGGACTGCGAGGGCGCTACAGCTTTGGCTGACGAC
TCAGGGCACTTTAGCTGCACTAGCGATGATGGAGTAGGAGATCCTGCTCA
GAAACCGGCGCCGCAGCCTGAACCGGACCAATCGATTTTTCTGGTGCGGC
AAGAGCTGCTTCGGACGCGCAGTGAGGTGCAAAGGCTCTTAAAATCGGAG
CAGTGGTACAAGCAGGAGCTTAAGTCCCAGAAGCACAGCAGGCTACAGAC
GCTAGAACGATTGTACGCACAGGAACGGAAGTATTTGATGGAGAACCAGA
AGCTGCAGCAAGAATCGATCCGCCTGCACACACAATGCGCCACTCTGGAG
AAGCAGCAGGAGCAGGGCTCACCATTTTCCCCTGGCTCATCGCCGTTTAA
AGCAGACTCGGAGTCACACGACTCCTCTTTTGAGGCCAAACAGCAGGAGG
CGCGCCTACGGGATCAGCGTCAGTTGATCGACGTGCTCCGAAGGCAAAAG
AAGATGCTTCTGGACGACATCCAGAGGATCAGTCTGGAACACGATGAAAA
ACTTTCGCAGTTGCAGCAAACTGTTGTCGGCATGGAGCTGGAGAGCAAGC
ACGTGACTGGAAAATGCAAGCAACTACTTGACCTTAAAAGTCAAATGGAG
CACCAGCTAGAGCTAAGAAGCACTACCCTACGCAGTGTCACCGCGGAGCG
TGATCAGCTGCGCCAAGTCATTGCTGAGCTTAACGAGACGCTGCAAACGC
AGGAGCATCTGTTAGCGCTAAAGGAACAGGAGTTCCTGGATTTGAAACAG
TACTACCAACAAAAGCTGAAACGGGAGAGTAGCATGGAAATTATGCACTC
TTACAGCATGACATTTCACGAAGAGATCAACAGAAAAACGAGTGAAATTG
CCAGCCTTAAGATTCTCTTAACGAGCTTCAGCCGAGCTGATGCTGATGTT
CTCACATGAAAAAGCAATGCGAGGAACAGCAGCGTCAGCTTGAGCAACTG
GAGTTCGCATTGCAGGCACAACTTTGGAAGAGCACTCAACTTCGCAAGCA
ATGCTCTAAACTGGAGACAGGTGAAAATTACAATTCTTTGGCTTCGTCCA
CTAGAATAAAGAAAGGCCTAAAGAAAATTT
UFO03482.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:08:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11248-RC | 2998 | CG11248-RC | 191..1320 | 9..1130 | 5140 | 97.8 | Plus |
| CG11248-RA | 2989 | CG11248-RA | 182..1311 | 9..1130 | 5140 | 97.8 | Plus |
| CG11248-RB | 2918 | CG11248-RB | 111..1240 | 9..1130 | 5140 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:08:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21680307..21681361 | 9..1060 | 4930 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:08:02 has no hits.
UFO03482.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:01:22 Download gff for
UFO03482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11248-RA | 128..1240 | 9..1113 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:55:51 Download gff for
UFO03482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11248-RB | 111..1223 | 9..1113 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:42:35 Download gff for
UFO03482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11248-RB | 111..1223 | 9..1113 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:42:35 Download gff for
UFO03482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21680297..21681419 | 1..1113 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:55:51 Download gff for
UFO03482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21673397..21674519 | 1..1113 | 97 | | Plus |
