UFO03489.5prime Sequence
1126 bp (987 high quality bases) assembled on 2009-02-03
> UFO03489.5prime
CAGTCGACATGCAAAGCTTGCAACTTAGCCAAGTGCTGCTAATACCGCTC
CTGCTGGCCCTGGTGGCCACCAACGTAGGCTCTGCCAGCGAAGTTCCACG
TCCGCTGGGTGTTCCGCTGGCCAAGGCTTCACTGTACCAACCTCGGGCGG
GCGAAAACAGTTGGACCTGCTTGGATGGCAGCCGCACCATACCCTTCTCC
CACATCAACGACGATTACTGCGACTGTGCGGATGGAAGCGATGAACCTGG
CACTGCGGCCTGTCCGCAGGGCCAGTTCCATTGTGTGAACAAAGGCCACC
AGCCGGTAAATATACCCAGTTCGCAGGTGCAGGACGGCATCTGTGACTGC
TGCGATGGCAGTGACGAGTCAGAGACGGTCGGTTGCCCGAATACCTGCTT
GGAACTCGGAGCAGCGGCGGCTGTCCAAAGGCGGAATGCAGCGGAGCTGC
ACAAACGTGGAGCTGAGCGGCGACAGGAGATGATTACCCGTGGCAAGCAG
ATGAGGGCCGAGCGAGAGGCGCGCCGCCTTGAGCTAGATCAACGACGCAA
GGAACAGGAACTGCTGCGCGCCGAAAAGGAGCAGCTCAAGCAAACCGCTG
AGGCTCTAGAGGCAGAAGCCATTGAAATCTTTAAGGAGCAACAGCGCGAG
GTGGATGCTGACACCGCACAGGCGGAGCGGGAGCCGCAACAGATGCGCCA
AGAGGCCACGCTCACCTTTGTGCGCTACGACACCAACAAAGATGGCTTCG
TCGAAGTTACCGAACTGATGGTCGACATGAATCTGGACAGAGATCGCAAC
GGCGTGGTAACTGTGGAGGAGGCCAAGTACTTCCTGGACGAGCGCGAACG
AGTGGATCTAGATGCTTTCGTAACGCTGGCCTGGCCGCGTCTCAGTCTTC
GCAAATGCTGGCCGAGGGTCTGTTCCAGCCGCCGCAGCCGGAGAAGTTGC
CCAGCAGCCAGAGGTCACCACCGAGTCGATCATGCCCACTCCTCCAAGCT
AATCGAAAAACAAGCTGAACTCCCCGGCGATGATGATATCGAGCGACGAA
GGTGAGGAGATCAGTACGATGATGAGAACGATGTGGCGTGCCAGCCTCTC
CGATGCGAAGCAGCACTACTCATCGA
UFO03489.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:14:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6453-RB | 2045 | CG6453-RB | 150..1226 | 9..1076 | 5015 | 98.1 | Plus |
| CG6453-RA | 2255 | CG6453-RA | 150..1226 | 9..1076 | 5015 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17483168..17484158 | 997..9 | 4750 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:14:01 has no hits.
UFO03489.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:01:14 Download gff for
UFO03489.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6453-RA | 137..1238 | 1..1089 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:21:20 Download gff for
UFO03489.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6453-RA | 142..1243 | 1..1089 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:54:16 Download gff for
UFO03489.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6453-RA | 142..1243 | 1..1089 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:54:16 Download gff for
UFO03489.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17483156..17484166 | 1..1008 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:21:20 Download gff for
UFO03489.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17483156..17484166 | 1..1008 | 98 | | Minus |
