UFO03493.5prime Sequence
562 bp (28 high quality bases) assembled on 2009-02-03
> UFO03493.5prime
CAATCCACATGACCTCGTACGTGCGTGCCATGTACTACTTTACCGGGGAA
CCGGGCTCCTCTGAGCTCTCCATCGCGACTGGCGACGTGCTCTCCGTGAC
CCTCACCGATGTGGGTGAACGGTGGTGGAAGGCCAAGAATGCCCGTGGCC
TCATTGGCCTCTTCCCGGCTGCGTACTTGGAGGGGATGTCTGTTGCCCAA
GCCCACAAGCTGAGCCCCAATGCAACGACGACGATGCCACCGGTTCCGGA
TCCCTTCCCCTCGCCCCCTTTGACTCGTTACGATCAGACGGCGGATGATG
ATGGCAGCAACTGGTATGATGAGGACGATTGGATCGACGACAATGACACG
TACTCAGAAATTGGTCCAGGTGGCCAAAATTCTGCTGGACAGTCGGCTCG
GGCTGGCGGATTGGCTCATTCCACCTTGGACTACGATAACAAACACCTGC
CCATCGCGCCCAACGATGATACCCAATCACTGGCCTCCGTGGCTGGTGGG
ACTGGTGCTGCTGGCACCGGCCAACAGGGCATGTTCGCCAAAAGTTCCGA
TTCATATATACT
UFO03493.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:47:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SH3PX1-RA | 2146 | CG6757-RA | 143..696 | 9..562 | 2095 | 91.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:47:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9713132..9713685 | 562..9 | 2095 | 91.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:47:43 has no hits.
UFO03493.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:05:22 Download gff for
UFO03493.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SH3PX1-RA | 132..692 | 1..562 | 91 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:06 Download gff for
UFO03493.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SH3PX1-RA | 136..696 | 1..562 | 91 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:59 Download gff for
UFO03493.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SH3PX1-RA | 136..696 | 1..562 | 91 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:59 Download gff for
UFO03493.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9713132..9713692 | 1..562 | 91 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:06 Download gff for
UFO03493.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9706232..9706792 | 1..562 | 91 | | Minus |
