UFO03505.5prime Sequence
286 bp (-74 high quality bases) assembled on 2009-02-03
> UFO03505.5prime
CACTTTTATACCCCATACATTATACGAAGTTATCAGTCGACATGACCATT
ACGGATCTGAAAGCCTTGGAACTTATGTTCCAGCGACCCCTGGAACCGGC
ATTCATCACTCGTGACTCCGGAAAAACTGTATTGGAACTGCCCGATTCCT
TCTATACGGATCGCTATCGCAATGACACCGAGGAGGTGGGCAATCGATTC
TCTAAGGACGTGGATCTGAAGATCCCAATTCAGGAGTTGAGCAACGTTCC
CAGTCTGGAGTTCACCAAAAAGATTGGTCTCAAGAA
UFO03505.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:10:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PPO1-RA | 2338 | CG42639-RA | 73..318 | 41..286 | 1170 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:10:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17889656..17889901 | 286..41 | 1170 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:10:50 has no hits.
UFO03505.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:05:07 Download gff for
UFO03505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bc-RA | 72..315 | 41..284 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:58:04 Download gff for
UFO03505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| proPO-A1-RA | 73..318 | 41..286 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:44:22 Download gff for
UFO03505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PPO1-RA | 73..318 | 41..286 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:44:22 Download gff for
UFO03505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17889656..17889901 | 41..286 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:58:04 Download gff for
UFO03505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13777161..13777406 | 41..286 | 98 | | Minus |
