Clone UFO03506 Report

Search the DGRC for UFO03506

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:35
Well:6
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG11060-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO03506.5prime Sequence

567 bp (-73 high quality bases) assembled on 2009-02-03

> UFO03506.5prime
CATTCCTATAGCCTACATTATACGAAGTTATCAGTCGACATGAGGCCCAC
GCACCACTCCGTCATAAACTCCTTGGGGAAAAAGATTTCGAATCAAACTA
TCAACGATTCGCACTCCAACAAACATAACTTCATGGATATGGAACAAGAG
GAAAAGCAGCCTGAGCATATGTACATGGCCACCCAGACCGTGGAGGACAT
TCTTAATGAGGTCCTGTGCATGCAGAATTTCCAGCAAAAGCAGTCGGACA
GCAACCTAGATCAGTTCTGCCACTCGGAGAGGTCCAGGGATCGGAAGCCG
GGCGACGATTTGGACATGGACCCGCGACTGCGCAGCTGGAACCGCGTGCT
GCAGGAGCGTAGGCGACTGCAGGATAGGATCGCTCGGCAGACGGGTAAGC
GGGCCGAGGACGTGCTCTTCAATCGCTTGGCGACCATCGACGAGGCCAAC
AAGCGGATGATTCTGCGCGTCCTTGACACCGTATACAGGTCACGACCTCT
TGCTCTCCTCAAGGACAATGTGACCTTGAACTCCCTGAAGCCGCGCTGTG
ATCCCCATCTCTGCCGC

UFO03506.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:12:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG11060-RA 2312 CG11060-RA 111..638 40..567 2565 99.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:12:04
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7175996..7176523 40..567 2565 99.1 Plus
Blast to na_te.dros performed on 2014-11-28 23:12:05 has no hits.

UFO03506.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:05:05 Download gff for UFO03506.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11060-RA 111..638 40..567 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:13:26 Download gff for UFO03506.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11060-RA 111..638 40..567 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:03:02 Download gff for UFO03506.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11060-RA 111..638 40..567 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:03:02 Download gff for UFO03506.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 7175996..7176523 40..567 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:13:26 Download gff for UFO03506.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3063501..3064028 40..567 99   Plus